ggKbase home page

Ig5770_scaffold_1836_16

Organism: Ig5770_Miz_z4_200_2015_Parcubacteria_38_85

near complete RP 39 / 55 BSCG 46 / 51 MC: 2 ASCG 11 / 38
Location: comp(9866..10258)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 id=2824330 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 125.0
  • Bit_score: 126
  • Evalue 1.50e-26
rplV; 50S ribosomal protein L22 similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 112.0
  • Bit_score: 117
  • Evalue 3.40e-24
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 128
  • Evalue 5.60e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_38_39 → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGCCAGTAAAAGTTCACCTAAGAAATTTAAGAACATCTCCCCGCAAGGTCAGGCTGGTTGTGGATTTAATCAGGGGATTAAGAATTGACGAAGCAATGGAGCAATTGAAATACATTCCCAAAAGATCAGCCGTACCCGTGATGAAACTTTTAGAATCGGCAGTGGCGGCGGCTGAGAATGATTATAAAATGAATAAAGCGGATTTATTTATTTCAAAAATAACCGTAGATGATGGAGCGACTTTGAAAAGGTCTATGCCGCGCGCAATGGGCAGGGCTTTTCCGATAATGAAAAGAACAAGCTGTATTACTATTGAGCTGGACAAAAAAGCCGCGGTATTGGAAGCGTTAGAAGAAGGAAATAAAGATAAAAATTTAAATAAAGAAAAGTAA
PROTEIN sequence
Length: 131
MPVKVHLRNLRTSPRKVRLVVDLIRGLRIDEAMEQLKYIPKRSAVPVMKLLESAVAAAENDYKMNKADLFISKITVDDGATLKRSMPRAMGRAFPIMKRTSCITIELDKKAAVLEALEEGNKDKNLNKEK*