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Ig5770_scaffold_7206_3

Organism: 07MI07_z4_2015_Ig5770_Miz_z4_200_2015_Falkowbacteria_37_12

near complete RP 40 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1707..2243)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2110563 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 189.0
  • Bit_score: 147
  • Evalue 1.10e-32
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 161.0
  • Bit_score: 121
  • Evalue 1.90e-25
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 177.0
  • Bit_score: 172
  • Evalue 6.10e-40

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Taxonomy

R_OD1_Falkowbacteria_46_11b → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAACTTCAAGGATCATTTTCTAATTTATCAAGTCAAAAGAGGCAAGTCAGAGGCCTTTGCTGAAATTTACGATAAATATCTGGATAAAATTTATCGTTTTATTTTTTTTCGAGTCTCCTCCCAAGAATCAGCAGAAGATCTTTCCAGCCAGGTTTTTCTTAAAGCTTTGGAATATTTAAATTCAGAAAAGAGGATTGAAAATTTACAAGCTTTTTTATATCAAATAGCCAGAAATTTAGTCATTGATTTTTATCGTGAAAGAGGAAAAGAAATTTCTTTGGATGCAGAAAATGTAGGAGATGTGGGAGATGTGGGAAATGCAGAAGATGTTAATGAGGCAATAGATATGGAAATGGATTTAGAAAAGGTAGAAAAAGCCTTACGAAAAATAAGAGATGAATACAAAGAAATAATTATCTTATATTATTTAGAAGAAATGTCAGTAGGAGAAATAGCGCGGATTTTGGGAAAAAGCAAAGGGAGCGTGAGGGTTTTGGTTCATAGGGCGTTGAGGGCGTTGCGAAAGAGTTTATAA
PROTEIN sequence
Length: 179
MNFKDHFLIYQVKRGKSEAFAEIYDKYLDKIYRFIFFRVSSQESAEDLSSQVFLKALEYLNSEKRIENLQAFLYQIARNLVIDFYRERGKEISLDAENVGDVGDVGNAEDVNEAIDMEMDLEKVEKALRKIRDEYKEIIILYYLEEMSVGEIARILGKSKGSVRVLVHRALRALRKSL*