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js4906-20-3_S2_scaffold_18_29

Organism: js4906-20-3_S2_Melainabacteria_curated_33_49

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 36677..37771

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=environmental samples RepID=R5KAK5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 366.0
  • Bit_score: 615
  • Evalue 3.00e-173
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 366.0
  • Bit_score: 615
  • Evalue 4.30e-173
RpoD subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 362.0
  • Bit_score: 429
  • Evalue 6.70e-118

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Taxonomy

Clostridium sp. CAG:967 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGACAAAGAAAAGACAATCAAGTTCAATTGTTAACATTATGGAAGAAGAAAATTTAGATATTTTAGATATCGAATCAGAAAAAGATGTCGATGATGCTGGTGACGAATCTTACATGAACGTAGACATCAGTACAGACAATATCGAAGATATAGTTTCAGCGGGAAAAATTGAGTCAAAATCACCTTATGAAGATGTATATTTGATGGATTCTCAAGAAGAAAAAGCTGATGATTTAGAAGTACCAAAAGGTGTTGCTGTTGATGATCCAGTACGTTTGTATTTAAGAGAAATTGGACGTATTAAATTATTATCTGCCAATGAAGAAATTGAGCTTGCAAGAGCGATTATTCAAGGTGGCACTCCGGGAGCTATTGCAAAAAGAAAATTAGTTCAAGCAAACTTACGTTTGGTTGTAAGTATTGCAAAAAAATATGTTGGTCGTGGCATGTTGTTCTTAGACCTAATTCAAGAAGGTAACTTGGGTTTAATCAGAGCTGCTGAAAAATTCGACCACGAAAGAGGTTTCAAATTCTCAACTTATGCTACTTGGTGGATTAGACAAGCTATTACTCGTGCTATTGCAGACCAAGCAAGAACAATCCGTATTCCAGTTCACATGGTTGAAACAATTAATAAATTGAAAAAGGTTACAAGAAGACTTGCTCAAGAGTTTTCTCGTAAACCGACTGAAGAAGAATTGGCAATGGAAATGAATGTTTCTATTTCAAAACTTAGAGAAATCATTAAAATTGCACAAGAACCATTATCATTGGAAACTCCAATTGGTAAAGAAGAAGATTCTCGTTTAGGTGACTTTATTGAAGATAAAGAAGCTGACGCTCCAATTAAAACAGTTGCATCAGACTTGTTAAGAGAAGACTTAGCTGAGGTTTTATGCACATTGTCACCAAGAGAAAGAGATGTACTTAGATTACGTTTCGGTATGGACGATGGTCGCCAAAGAACTTTGGAAGAAGTAGGACAATTGTTTGGTGTAACTCGTGAACGTATCAGACAAATTGAAGCGAAAGCGCTTAGAAAATTAAGACATCCAAACAGAAGCAAACGCTTAAGAGAATATGTTGAAAGTTAA
PROTEIN sequence
Length: 365
MTKKRQSSSIVNIMEEENLDILDIESEKDVDDAGDESYMNVDISTDNIEDIVSAGKIESKSPYEDVYLMDSQEEKADDLEVPKGVAVDDPVRLYLREIGRIKLLSANEEIELARAIIQGGTPGAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRRLAQEFSRKPTEEELAMEMNVSISKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPIKTVASDLLREDLAEVLCTLSPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKALRKLRHPNRSKRLREYVES*