ggKbase home page

js4906-23-3_S14_scaffold_271_19

Organism: js4906-23-3_S14_Melainabacteria_curated_33_15

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 16779..17876

Top 3 Functional Annotations

Value Algorithm Source
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 366.0
  • Bit_score: 427
  • Evalue 3.30e-117
RNA polymerase sigma factor SigA Tax=Fusobacterium sp. CAG:815 RepID=R7LWC5_9FUSO similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 365.0
  • Bit_score: 669
  • Evalue 1.00e-189
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 365.0
  • Bit_score: 669
  • Evalue 1.50e-189

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fusobacterium sp. CAG:815 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGACAAAAAAAAGACAAGCAAGCTCCTCAGTAGTCAGCGTAATGGAAGATGAATCAATGGATTTACATGACATCAATGAGGATTCAGTTTTAGACTCTGAACATGATGCGATTAATTATATGAATGTTGACATTTCAACTGACAACATTGAAGATATTGTTACATCAAAGATGGGTGACAAAGTTAATGCAGAAGATATCTATATGATTCACAACTCTGATGAAACTGACCAAAGTGATATGGAATTGCCAAAAAGCGTTGCTATTGACGATCCTGTAAGATTATATCTACGTGAAATCGGTAGAATTAAATTGTTATCAGCAAGCGAAGAAATTGAACTTGCAAGAAAGATTTTAGAAGGCGGCACTCCTGGAGCAATTGCAAAAAGGAAATTAGTTCAAGCCAACTTACGTTTAGTTGTAAGTATCGCTAAAAAATACGTTGGTCGTGGAATGTTATTCCTAGACTTGATTCAAGAAGGTAACTTAGGTTTAATCCGTGCAGCTGAAAAATTTGACCACGAAAGAGGTTTTAAATTTTCAACTTACGCTACTTGGTGGATTAGACAAGCGATTACTCGTGCAATTGCCGACCAAGCAAGAACTATTAGAATTCCTGTTCACATGGTTGAAACTATCAATAAATTGAAAAAAGTTACAAGAAAACTTGCTCAAGACCTTTCAAGAAAACCAACCGAAGATGAATTAGCAGCTGAAATGAATGTTTCTATTCCAAAACTTCGTGAAATTATTAAAATTGCTCAAGAACCTTTGTCATTGGAAACTCCAATCGGTAAAGAAGAAGATTCTCGTTTGGGCGACTTTATTGAAGATAAAGAAGCAGATGCTCCTGTAAAAATGGTTGCATCAGAACTCTTGAAAGAAGATTTGGCAGAAGTTCTTTGTACATTATCTCCACGTGAACGTGATGTATTGAGATTACGTTTTGGTATGGACGATGGTCGCCAAAGAACATTGGAAGAAGTTGGACAATTGTTCGGTGTTACTCGTGAACGTATCAGACAAATTGAAGCAAAAGCTTTAAGAAAATTACGTCATCCTAACCGTAAAAAACGTTTAGAAGAATATGTTGAGTAA
PROTEIN sequence
Length: 366
MTKKRQASSSVVSVMEDESMDLHDINEDSVLDSEHDAINYMNVDISTDNIEDIVTSKMGDKVNAEDIYMIHNSDETDQSDMELPKSVAIDDPVRLYLREIGRIKLLSASEEIELARKILEGGTPGAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRKLAQDLSRKPTEDELAAEMNVSIPKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPVKMVASELLKEDLAEVLCTLSPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKALRKLRHPNRKKRLEEYVE*