ggKbase home page

js4906-25-3_S22_scaffold_74

Search features with annotation key words

Displaying items 61-90 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-25-3_S22_scaffold_74_61
unknown

Not on your lists

58081..58176
DNA (96bp) protein (32aa)

This feature has no annotations

js4906-25-3_S22_scaffold_74_62
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

58201..59136
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Ribosomal RNA small subunit methyltransferase H Tax=Clostridium sp. CAG:813 RepID=R7MCR7_9CLOT
S-adenosyl-methyltransferase MraW
js4906-25-3_S22_scaffold_74_63
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

59194..59643
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7J4X5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE58984.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-25-3_S22_scaffold_74_64
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

59719..61452
DNA (1734bp) protein (578aa)
spoVD; stage V sporulation protein D; K08384 stage V sporulation protein D (sporulation-specific penicillin-binding protein) bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CCZ50284.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
cell division protein FtsI/penicillin-binding protein 2
js4906-25-3_S22_scaffold_74_65
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

61471..62931
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Fusobacterium sp. CAG:439 RepID=R7J8I3_9FUSO
js4906-25-3_S22_scaffold_74_66
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

62931..63878
DNA (948bp) protein (316aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (NagA) Tax=Clostridium sp. CAG:768 RepID=R7I367_9CLOT
N-acetylglucosamine-6-phosphate deacetylase (NagA) {ECO:0000313|EMBL:CDE44957.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-25-3_S22_scaffold_74_67
unknown

Not on your lists

63878..64117
DNA (240bp) protein (80aa)

This feature has no annotations

js4906-25-3_S22_scaffold_74_68
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(64179..65687)
DNA (1509bp) protein (503aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Lysine--tRNA ligase Tax=Clostridium sp. CAG:715 RepID=R5DPY0_9CLOT
hypothetical protein
js4906-25-3_S22_scaffold_74_69
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(65724..67889)
DNA (2166bp) protein (722aa)
dth:DICTH_1000 penicillin-binding protein 1A (PBP-1a) (PBP1a) (EC:2.4.2.- 3.4.-.-) bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Penicillin-binding protein 1A putative {ECO:0000313|EMBL:CCX80046.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
penicillin-binding protein
js4906-25-3_S22_scaffold_74_70
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

67960..68349
DNA (390bp) protein (130aa)
hypothetical protein; K06940 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE89044.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-25-3_S22_scaffold_74_71
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

68398..69711
DNA (1314bp) protein (438aa)
S-layer domain-containing protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWR2_9FUSO
S-layer domain-containing protein {ECO:0000313|EMBL:CDE92188.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
putative S-layer protein
js4906-25-3_S22_scaffold_74_72
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

69996..70652
DNA (657bp) protein (219aa)
Phospholipid/glycerol acyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5HFD3_9SPIR
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCY23441.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
js4906-25-3_S22_scaffold_74_73
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

70678..71349
DNA (672bp) protein (224aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Acinetobacter sp. CAG:196 RepID=R5SYB6_9GAMM
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CCZ51596.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
js4906-25-3_S22_scaffold_74_74
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

71390..71719
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=Ectocarpus siliculosus RepID=D8LMF5_ECTSI bin=MEL_C2 species=Ectocarpus siliculosus genus=Ectocarpus taxon_order=Ectocarpales taxon_class=unknown phylum=Phaeophyceae tax=MEL_C2 organism_group=Melainabacteria
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
ssb; single-stranded DNA-binding protein
js4906-25-3_S22_scaffold_74_75
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

71719..73044
DNA (1326bp) protein (442aa)
type III effector Hrp-dependent outer protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Type III effector Hrp-dependent outer protein {ECO:0000313|EMBL:CDE88208.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-25-3_S22_scaffold_74_76
unknown

Not on your lists

73128..73661
DNA (534bp) protein (178aa)

This feature has no annotations

js4906-25-3_S22_scaffold_74_77
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73806..74423
DNA (618bp) protein (206aa)
Putative glycosyltransferase Tax=Clostridium sp. CAG:306 RepID=R6P3Q6_9CLOT
Putative glycosyltransferase {ECO:0000313|EMBL:CDC18070.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
js4906-25-3_S22_scaffold_74_78
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

74439..76034
DNA (1596bp) protein (532aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Fusobacterium sp. CAG:439 RepID=R7JD23_9FUSO
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CDE61656.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
peptidase S1 and S6 chymotrypsin/Hap
js4906-25-3_S22_scaffold_74_79
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76217..79009
DNA (2793bp) protein (931aa)
Protein translocase subunit SecA Tax=Clostridium sp. CAG:306 RepID=R6QFM6_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
Preprotein translocase subunit SecA
js4906-25-3_S22_scaffold_74_80
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(79260..81170)
DNA (1911bp) protein (637aa)
Diguanylate cyclase and metal dependent phosphohydrolase Tax=Fusobacterium sp. CAG:815 RepID=R7M1F8_9FUSO
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE93743.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
GAF sensor-containing diguanylate cyclase
js4906-25-3_S22_scaffold_74_81
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

81369..82952
DNA (1584bp) protein (528aa)
TPR repeat-containing protein Tax=Fusobacterium sp. CAG:815 RepID=R7LV67_9FUSO
TPR repeat-containing protein {ECO:0000313|EMBL:CDE91643.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-25-3_S22_scaffold_74_82
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists


comp(83055..83324)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Brachyspira sp. CAG:484 RepID=R5H2A5_9SPIR
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
30S ribosomal protein S15
js4906-25-3_S22_scaffold_74_83
unknown

Not on your lists

comp(83431..83814)
DNA (384bp) protein (128aa)

This feature has no annotations

js4906-25-3_S22_scaffold_74_84
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

84145..85323
DNA (1179bp) protein (393aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Adenylosuccinate lyase Tax=Clostridium sp. CAG:967 RepID=R5KLZ7_9CLOT
adenylosuccinate lyase
js4906-25-3_S22_scaffold_74_85
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

85376..87568
DNA (2193bp) protein (731aa)
7TM receptor with intracellular metal dependent phosphohydrolase Tax=Brachyspira sp. CAG:484 RepID=R5H5K1_9SPIR
7TM receptor with intracellular metal dependent phosphohydrolase {ECO:0000313|EMBL:CCY24793.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
7TM receptor with intracellular metal dependent phosphohydrolase
js4906-25-3_S22_scaffold_74_86
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

87549..88067
DNA (519bp) protein (173aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Endoribonuclease YbeY Tax=Clostridium sp. CAG:967 RepID=R5KRQ9_9CLOT
putative metalloprotease
js4906-25-3_S22_scaffold_74_87
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

88060..88449
DNA (390bp) protein (130aa)
Diacylglycerol kinase Tax=Fusobacterium sp. CAG:439 RepID=R7J8Z3_9FUSO
Diacylglycerol kinase {ECO:0000313|EMBL:CDE60305.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
diacylglycerol kinase
js4906-25-3_S22_scaffold_74_88
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(88433..89374)
DNA (942bp) protein (314aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Homoserine kinase Tax=Acinetobacter sp. CAG:196 RepID=R5SIC9_9GAMM
homoserine kinase
js4906-25-3_S22_scaffold_74_89
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(89381..90211)
DNA (831bp) protein (277aa)
Metal dependent phosphohydrolase Tax=Clostridium sp. CAG:967 RepID=R5K8J2_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCY63003.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
HAD-superfamily hydrolase
js4906-25-3_S22_scaffold_74_90
unknown

Not on your lists

90302..91099
DNA (798bp) protein (266aa)

This feature has no annotations

Displaying items 61-90 of 107 in total

View Taxonomy