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MEL_A1_1_128

Organism: MEL.A1

near complete RP 53 / 55 MC: 15 BSCG 51 / 51 ASCG 0 / 38
Location: 134400..135254

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=62 to=110 evalue=3.9e-09) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.90e-09
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=59 to=82 evalue=0.0068 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.80e-03

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Taxonomy

Clostridium sp. CAG:715 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGTTGACCAATCAGCACCCGCCTCAATCCTCCCTCATAAGGGAGGATGCAATGCACAAGTTTTGTCCAGCGAGAACAAAATAGCTCCTTCCTTAGTTATGGAAGGTTGGGATGGGTTTCAGACTAAAGAAATGAAACTTAAAATGCGAACTGGTGCTAACAATACAAGTAAAAGGGTAGCATTTACTTTAGCTGAAGTCCTCATCACTCTCGGCATCATTGGTGTAGTGGCTGCGATGACTTTACCAACATTGATAAACAATGCTCAAAATAAACAATTAGAAGTTGCTTTTAAAAAATCCTATTCTGCCTTATCTCAAATTGCGCAGCGTGTTGCATTAGAAGATTACGGTGGTCAAATTCCAGATGATGCGTTAGGTGAGAGTTTGGGGTATTACGCAAAATATTTGAATGGAAAACGTTGTACTGGGACTGCTGAAAATGGATGTCCAGCAAATGCAGATGGTGATAATTATTGTAATTTTATGTATAAAACATATAAAGATTTTTCTGGAAAAGTTAGCGCACCGTGTATTGGAAATGATTATGTTGTAAATATTGTAAGTGGAAGTACATTCTATTTTGATTATGCTGGTGAGGGAGAAGATATATATGCAAAGCAATTTGTTGTTATTGATGTAAATGGTTGGCAAAAACGACCTAACAAATTGGGGCATGATATGTTTTTGTTTTCTATTAGTCGAGATGGGAAGGTTACCGCAGGAGGAGCAGAAAACAGTCAGTTCTCTAAAAATGGGTATTGTAATAGTAGCACTACTTTTTCAAGGAATGGTTATGGTTGTACAATCAATGCCATTAATGAAAAAGATTATTTCAAAAAATTGCCACATTAA
PROTEIN sequence
Length: 285
MVDQSAPASILPHKGGCNAQVLSSENKIAPSLVMEGWDGFQTKEMKLKMRTGANNTSKRVAFTLAEVLITLGIIGVVAAMTLPTLINNAQNKQLEVAFKKSYSALSQIAQRVALEDYGGQIPDDALGESLGYYAKYLNGKRCTGTAENGCPANADGDNYCNFMYKTYKDFSGKVSAPCIGNDYVVNIVSGSTFYFDYAGEGEDIYAKQFVVIDVNGWQKRPNKLGHDMFLFSISRDGKVTAGGAENSQFSKNGYCNSSTTFSRNGYGCTINAINEKDYFKKLPH*