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ACD20_23

Alias: ACD20_18280.45360.14

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Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_23_31

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23765..24559
DNA (795bp) protein (265aa)
seg (db=Seg db_id=seg from=207 to=227)
seg (db=Seg db_id=seg from=157 to=173)
seg (db=Seg db_id=seg from=117 to=135)
seg (db=Seg db_id=seg from=31 to=46)
ACD20_23_32

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comp(24576..25367)
DNA (792bp) protein (264aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=64 to=263 evalue=1.1e-09)
Uncharacterized protein {ECO:0000313|EMBL:EKE04211.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_23_33

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comp(25468..26493)
DNA (1026bp) protein (342aa)
RNA polymerase sigma factor RpoD
seg (db=Seg db_id=seg from=192 to=203)
seg (db=Seg db_id=seg from=17 to=46)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=300 to=326 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD20_23_34

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26874..27194
DNA (321bp) protein (107aa)
seg (db=Seg db_id=seg from=60 to=92)
seg (db=Seg db_id=seg from=9 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKE04213.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_23_35

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27359..27619
DNA (261bp) protein (87aa)
27359..27619 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04214.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_23_36

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comp(27661..28131)
DNA (471bp) protein (157aa)
flp; transcriptional regulator Flp
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=11 to=142 evalue=3.0e-28 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=17 to=154 evalue=6.6e-24 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
cNMP_binding (db=HMMPfam db_id=PF00027 from=39 to=125 evalue=9.2e-22 interpro_id=IPR000595 interpro_description=Cyclic nucleotide-binding)
ACD20_23_37

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28340..29614
DNA (1275bp) protein (425aa)
extracellular solute-binding protein
seg (db=Seg db_id=seg from=402 to=416)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=24 to=423 evalue=1.1e-85)
SBP_bac_1 (db=HMMPfam db_id=PF01547 from=46 to=331 evalue=2.7e-42 interpro_id=IPR006059 interpro_description=Bacterial extracellular solute-binding, family 1 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
ACD20_23_38

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29617..31800
DNA (2184bp) protein (728aa)
integral membrane protein
integral membrane protein
Integral membrane protein-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D09_SOLUE (db=UNIREF evalue=5.0e-97 bit_score=359.0 identity=34.41 coverage=92.8571428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=383 to=405)
ACD20_23_39

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comp(32728..32937)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=bacterium S5 RepID=D3BWV6_9BACT (db=UNIREF evalue=2.0e-17 bit_score=91.3 identity=58.21 coverage=94.2857142857143)
hypothetical protein
SP0561-like (db=superfamily db_id=SSF140683 from=3 to=68 evalue=1.8e-17)
DUF1858 (db=HMMPfam db_id=PF08984 from=7 to=59 evalue=2.1e-16 interpro_id=IPR015077 interpro_description=Domain of unknown function DUF1858)
ACD20_23_40

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comp(33102..33608)
DNA (507bp) protein (169aa)
hypothetical protein
DUF151 (db=HMMPfam db_id=PF02577 from=4 to=136 evalue=4.3e-47 interpro_id=IPR003729 interpro_description=Protein of unknown function DUF151)
Hypothetical protein TM0160 (db=superfamily db_id=SSF103256 from=1 to=141 evalue=3.8e-45 interpro_id=IPR003729 interpro_description=Protein of unknown function DUF151)
protein of unknown function DUF151; K08999 hypothetical protein alias=ACD20_18280.45360.14G0040,ACD20_18280.45360.14_40,ACD20_C00023G00040 id=18330 tax=ACD20 species=Cyanothece sp. PCC 7425 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_23_41

Not on your lists

33804..34196
DNA (393bp) protein (131aa)
33804..34196 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04175.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_23_42

Not on your lists

comp(34267..36930)
DNA (2664bp) protein (888aa)
Pyruvate, phosphate dikinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEY0_CARHZ (db=UNIREF evalue=0.0 bit_score=1125.0 identity=62.83 coverage=97.4099099099099)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
coiled-coil (db=Coil db_id=coil from=715 to=736 evalue=NA)
ACD20_23_43

Not on your lists

comp(37027..37665)
DNA (639bp) protein (213aa)
class II aldolase/adducin family protein
coiled-coil (db=Coil db_id=coil from=192 to=213 evalue=NA)
AraD-like aldolase/epimerase (db=superfamily db_id=SSF53639 from=2 to=206 evalue=1.5e-54 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin, N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.40.225.10 from=2 to=200 evalue=7.0e-52 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin, N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
ACD20_23_44

Not on your lists

37932..38147
DNA (216bp) protein (72aa)
FeoA (db=HMMPfam db_id=PF04023 from=3 to=69 evalue=4.4e-11 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
no description (db=HMMSmart db_id=SM00899 from=2 to=70 evalue=1.4e-08 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
Uncharacterized protein {ECO:0000313|EMBL:EKE04178.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_23_45

Not on your lists

38164..40038
DNA (1875bp) protein (625aa)
ferrous iron transport protein B
ferrous iron transport protein B
Ferrous iron transport protein FeoB n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXR6_HALOH (db=UNIREF evalue=4.0e-166 bit_score=588.0 identity=52.29 coverage=95.52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=278)
ACD20_23_46

Not on your lists

comp(40343..42046)
DNA (1704bp) protein (568aa)
Putative exonuclease n=2 Tax=Roseovarius RepID=A3W679_9RHOB (db=UNIREF evalue=5.0e-17 bit_score=93.6 identity=29.82 coverage=35.9154929577465)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
seg (db=Seg db_id=seg from=546 to=554)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=191 to=388 evalue=1.3e-35 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD20_23_47

Not on your lists

comp(42066..43955)
DNA (1890bp) protein (630aa)
seg (db=Seg db_id=seg from=528 to=535)
seg (db=Seg db_id=seg from=335 to=348)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=35 to=261 evalue=9.0e-22)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=365 to=623 evalue=4.8e-15)
ACD20_23_48

Not on your lists

44320..44721
DNA (402bp) protein (134aa)
seg (db=Seg db_id=seg from=90 to=99)
seg (db=Seg db_id=seg from=30 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
coiled-coil (db=Coil db_id=coil from=104 to=125 evalue=NA)
ACD20_23_49

Not on your lists

44779..45180
DNA (402bp) protein (134aa)
mutator MutT protein
seg (db=Seg db_id=seg from=47 to=60)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=35 to=56 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=4 to=126 evalue=1.1e-32 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Displaying items 31-49 of 49 in total

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