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ACD20_50

Alias: ACD20_3188.9497.15

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_50_1

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comp(45..914)
DNA (870bp) protein (290aa)
diguanylate cyclase
no description (db=HMMSmart db_id=SM00267 from=105 to=282 evalue=1.5e-54 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=121 to=284 evalue=9.3e-53 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=107 to=283 evalue=2.8e-46)
ACD20_50_2

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comp(1009..1389)
DNA (381bp) protein (127aa)
1009..1389 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_50_3

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1580..2713
DNA (1134bp) protein (378aa)
beta-lactamase
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
seg (db=Seg db_id=seg from=22 to=36)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=122 to=372 evalue=3.9e-57 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
ACD20_50_4

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2750..4621
DNA (1872bp) protein (624aa)
integral membrane sensor signal transduction histidine kinase
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
seg (db=Seg db_id=seg from=245 to=256)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
ACD20_50_5

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4614..5282
DNA (669bp) protein (223aa)
two-component response regulator
Two component transcriptional regulator, LuxR family n=2 Tax=Arthrospira RepID=B5W9R2_SPIMA (db=UNIREF evalue=1.0e-50 bit_score=202.0 identity=43.22 coverage=98.2062780269058)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=175 to=202 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
CheY-like (db=superfamily db_id=SSF52172 from=3 to=133 evalue=2.8e-31 interpro_id=IPR011006 interpro_description=CheY-like)
ACD20_50_6

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comp(5293..5784)
DNA (492bp) protein (164aa)
HNH endonuclease n=3 Tax=Chroococcales RepID=Q4C713_CROWT (db=UNIREF evalue=5.0e-50 bit_score=199.0 identity=57.14 coverage=96.9512195121951)
HNH endonuclease
no description (db=HMMSmart db_id=SM00507 from=66 to=117 evalue=2.3e-17 interpro_id=IPR003615 interpro_description=HNH nuclease)
HNH (db=HMMPfam db_id=PF01844 from=78 to=120 evalue=9.2e-13 interpro_id=IPR002711 interpro_description=HNH endonuclease GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: endonuclease activity (GO:0004519))
ACD20_50_7

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6359..7204
DNA (846bp) protein (282aa)
rpsB; 30S ribosomal protein S2
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 n=2 Tax=Exiguobacterium RepID=RS2_EXISA (db=UNIREF evalue=2.0e-87 bit_score=325.0 identity=66.37 coverage=79.7872340425532)
coiled-coil (db=Coil db_id=coil from=249 to=270 evalue=NA)
ACD20_50_8

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7232..7882
DNA (651bp) protein (217aa)
elongation factor Ts
EF_TS_1 (db=PatternScan db_id=PS01126 from=11 to=26 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
EF_TS_2 (db=PatternScan db_id=PS01127 from=75 to=85 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=6 to=211 evalue=2.2e-55 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ACD20_50_9

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8161..9516
DNA (1356bp) protein (452aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
coiled-coil (db=Coil db_id=coil from=212 to=233 evalue=NA)
seg (db=Seg db_id=seg from=419 to=427)
seg (db=Seg db_id=seg from=6 to=21)
Displaying 9 items

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