ggKbase home page

ACD20_47_34

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 36565..36954

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 128.0
  • Bit_score: 187
  • Evalue 2.00e-45
DTDP-4-dehydrorhamnose epimerase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPS3_9GAMM (db=UNIREF evalue=1.0e-40 bit_score=168.0 identity=58.59 coverage=97.6923076923077) similarity UNIREF
DB: UNIREF
  • Identity: 58.59
  • Coverage: 97.69
  • Bit_score: 168
  • Evalue 1.00e-40
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=1 to=127 evalue=4.3e-30 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.30e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 390
ATGCATATGCTCAGAAATGATGATTCATGCTTTGAGCAGTTCGGGGAAATCTACTTTTCAGTTGTTCATCCGGGAATCATAAAGGGTTGGCATATTCATACAGAAATGACCCTTAATTATGCAGTAGTTGAGGGGAATATCAAGCTGGTTCTTTATGATGAAAGAGAGCTTTCCCCAACTAAAGGCATGATACAAGAAATTTGCCTTGGTCCTGATAACTATAAACTTGTAAAAATCCCGCCAATGGTATGGAACGGATTTAAAGGAATCGGATCAAAGCCTGCTATTGTTGCAAATTGCTCAACAATTCCGCATAATCCTGATGAAATACAAAGATTAGATCCATTCAGCAATCATATAGGTTACGATTGGAACTTAAAACACTGCTAG
PROTEIN sequence
Length: 130
MHMLRNDDSCFEQFGEIYFSVVHPGIIKGWHIHTEMTLNYAVVEGNIKLVLYDERELSPTKGMIQEICLGPDNYKLVKIPPMVWNGFKGIGSKPAIVANCSTIPHNPDEIQRLDPFSNHIGYDWNLKHC*