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MEL_C3_30_7

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 6031..6465

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF02472 from=11 to=130 evalue=1.3e-19 interpro_id=IPR003400 interpro_description=Biopolymer transport protein ExbD/TolR GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-19
ExbD/TolR family protein {ECO:0000313|EMBL:CDC21638.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 143.0
  • Bit_score: 193
  • Evalue 1.60e-46

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGCATTCAAAAGTTCGAAAAATGACAAAATGTTTAATGAAATAAACATTACACCGTTAACTGACATATTTTTAGTGTTGTTAATAATTATGATGGTTGTGGCTCCAACATTTCAATCTAATGATAACAGCATACAAGTTCCAAAAATCAATAGCGGATTATCTGTTGAAAATAGTTTGGCAACTGTTTCAATAACTAAAGAGGGCAATTTTTTTATAAATGGAAATTCAATTAGTGACGATAATCTGCAAACTGAACTTGAAAATTTAAAACCTAATTTGGAAAAAAAGGAAGTTATTGTACGAGCTGATAGTCAAACTAAATCAAGTGAAATTATGAAAGTTATGAAAGCTGCGACATGCGCTCAATATGAAAAGTTAACAGTTGCCGGTGAACCTTTATCAAAGAAAGAACAGGAAGAACTATTACAATGA
PROTEIN sequence
Length: 145
MAFKSSKNDKMFNEINITPLTDIFLVLLIIMMVVAPTFQSNDNSIQVPKINSGLSVENSLATVSITKEGNFFINGNSISDDNLQTELENLKPNLEKKEVIVRADSQTKSSEIMKVMKAATCAQYEKLTVAGEPLSKKEQEELLQ*