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MEL_C3_4_41

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: comp(34362..34952)

Top 3 Functional Annotations

Value Algorithm Source
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=5 to=195 evalue=4.0e-05 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.00e-05
Uncharacterized protein {ECO:0000313|EMBL:CDC20291.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 203.0
  • Bit_score: 130
  • Evalue 2.20e-27

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGTTACATCTGTGGTTCTTGAAAATCAGGTTAAAATAATTCAGCAGCTTGTAAGAAATAATCCAAGATTTTCAGGAAATGAAGATCTTTTTGAAGAATTTACCAACGAAGCATACTCAAAACTTCATGTCTTTATAAATTCAATTAAAGATCTAACAAAAATTGAAGGCTATGCAGCTAAGATCGTTAACACTTCAATACTTACAATATTAAAACAGCATAAACGTTTAAAAAACGCTTGTTCCAACATTAATCAAAAGAAGACAATGGCATTGGATATTTCAAATATCAATGAAGTCATTGAAAATTCCAGCTTGGAATATGAAGATAAAATAATGTATGAACTTTTAGACCCTAAATTTTCATATTCAAAAACAATTGAAAACAAAGAACTTATGCAGTCAATTTTGAATTCGGTTATGGAAATAAATAAAGAATATCCAAGTGAACAATATTTAAAACTTTATAAACTTCGTTATATTAATAAAAAAACACAGAATCAGATATCCTTTGAACTTAATATTTCACAAAATGAAGTTTCAAAACGTTTATTTGAATTAAGTAACTTAGTAAAATTATACTTAAATTAA
PROTEIN sequence
Length: 197
MVTSVVLENQVKIIQQLVRNNPRFSGNEDLFEEFTNEAYSKLHVFINSIKDLTKIEGYAAKIVNTSILTILKQHKRLKNACSNINQKKTMALDISNINEVIENSSLEYEDKIMYELLDPKFSYSKTIENKELMQSILNSVMEINKEYPSEQYLKLYKLRYINKKTQNQISFELNISQNEVSKRLFELSNLVKLYLN*