ggKbase home page

MEL_C3_25_7

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: comp(5038..5325)

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF06689 from=37 to=68 evalue=1.8e-12 interpro_id=IPR010603 interpro_description=Zinc finger, ClpX C4-type GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.80e-12
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=36 to=73 evalue=4.7e-08) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.70e-08
ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX (db=HMMPanther db_id=PTHR11262:SF4 from=33 to=64 evalue=0.00035 interpro_id=IPR004487 interpro_description=Clp protease, ATP-binding subunit ClpX GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457), Molecular Function: unfolded protein binding (GO:0051082)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.50e-04

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCTAACAAAGACGATAAAGTAGTTTCATTGATGGGTATGAAACATAACAAAGCTAGTCGAGCAGCCAAAACAGGGAAAAAATCTGACAAAATGGATGAAGGACCTTTGTATTGCAGTTTTTGTAATCGTCCGAATACCGAGGTTGTTAAGATGGTAAAAGGTCCCGGAGTTAACATCTGTGCTGAATGTACAATGATTTCACTTCAATATCTTCTTCTTGAAGACAAACTTCCATCCCGCGAAGCTCAGCGAATTCTTGACAGTTTTTGGGATAGGTTAAATTAA
PROTEIN sequence
Length: 96
MANKDDKVVSLMGMKHNKASRAAKTGKKSDKMDEGPLYCSFCNRPNTEVVKMVKGPGVNICAECTMISLQYLLLEDKLPSREAQRILDSFWDRLN*