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MEL_C3_13_2

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 1085..1423

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF06480 from=9 to=95 evalue=3.7e-12 interpro_id=IPR011546 interpro_description=Peptidase M41, FtsH extracellular GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Molecular Function: ATP binding (GO:0005524), Molecular Function: zinc ion binding (GO:0008270), Cellular Component: integral to membrane (GO:0016021)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.70e-12
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 105.0
  • Bit_score: 75
  • Evalue 4.90e-11

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCAAAAAAATCAACAAGTCGGATTTTTTATTGTAATAGGAGTTCTAACAGTCGTTTTATTTTTAATGCTTTTAAGCGGAACGACTACAAATACTATTGAAATATCATATTCAAATTTTGTAAATAAAGTACAATCAGGTGAAATTGCAAAAGTTGAAGTAGCAGGTAATACTATTTTATCAGAACCAAAAGTGCAACCTAAAAAAAATGTAGCGATTGTAAAACAAACATCAGCACCTGCTCCAAAAGTTATTTATAAAACTGAAGCACCAAACAACGATTCAACTTTAATGCCAATGTTAAAACAATTGTCAAAATTCGCTTCATTTTGTTCATAA
PROTEIN sequence
Length: 113
MQKNQQVGFFIVIGVLTVVLFLMLLSGTTTNTIEISYSNFVNKVQSGEIAKVEVAGNTILSEPKVQPKKNVAIVKQTSAPAPKVIYKTEAPNNDSTLMPMLKQLSKFASFCS*