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MEL_C3_63_2

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: comp(1096..2001)

Top 3 Functional Annotations

Value Algorithm Source
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 291.0
  • Bit_score: 212
  • Evalue 1.40e-52
seg (db=Seg db_id=seg from=70 to=81) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
ispH_lytB: 4-hydroxy-3-methylbut-2-enyl dip (db=HMMTigr db_id=TIGR00216 from=14 to=301 evalue=3.7e-83 interpro_id=IPR003451 interpro_description=LytB protein GO=Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway (GO:0019288), Biological Process: oxidation-reduction process (GO:0055114)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.70e-83

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Taxonomy

Clostridium sp. CAG:715 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGACCAAACGATTGGAAAATTAATAACTTGCCAAAGAATATAAAATTAGCTAAGACAGCAGGTTTTTGTTATGGTGTTAAACGTGCAGTCGAAACAACTATAAAATTAAAATTTGAAAACCCGAACAAAAATGTATGTGTATTGGGTGAGCTTATACATAATCAAAATGTTATTAGTGAACTTGAAAACCTTGGTATTAAGACAATAAATGATAATAATTTTGATGACATTTCAGATATTTGTGTAATAAGAAGTCATGGCGCCTCACCAGGTGTATTTGAGACTTTAATGACTAAACAAGCTCAAATTGTTGATATGACATGTCCTGATGTCAAAAAAGTACAACAAAAAGCTATTGAACTTGTCAAATCAGGTTTTTTACTTATAATTTTAGGAAAAAGCGATCATCCTGAAGTTATTGCAATAAAAGCTAATGCTCAAAAATATTCACAAGATGATGACGTCTTCGTTATATCAAATATAAACGAATTAAAAAAACTTGAAAATAAAATAAAAGCACATAAAAAAATAGGTGTCGTTATTCAAACTACACAAAAACTTGAACTTCTAAGGGAAACAGTTAATTATTTAATTCCAATAGTTAAAGATTTACGGGTTTTTAACACCATTTGTCCATCAACAACATCACGTCAAAATGAAGCAAAGAATATAGCAAAAGAATCAGACCTGATGATTGTTGTTGGAAGCAAAAAAAGTGCAAATACAACACATTTAGCTGAATTACTTAAGGATATAACAAATACTATTCATATTGAATCACAAGATGAACTTTATTTATATAAGCATATTATTGATATTGCAAAAAATATAGGTGTGACAGCCGGAGCTTCAACACCTGATAATATTATTGAAAACGTTATTCTAGAATTGAAAACATATTGA
PROTEIN sequence
Length: 302
MRPNDWKINNLPKNIKLAKTAGFCYGVKRAVETTIKLKFENPNKNVCVLGELIHNQNVISELENLGIKTINDNNFDDISDICVIRSHGASPGVFETLMTKQAQIVDMTCPDVKKVQQKAIELVKSGFLLIILGKSDHPEVIAIKANAQKYSQDDDVFVISNINELKKLENKIKAHKKIGVVIQTTQKLELLRETVNYLIPIVKDLRVFNTICPSTTSRQNEAKNIAKESDLMIVVGSKKSANTTHLAELLKDITNTIHIESQDELYLYKHIIDIAKNIGVTAGASTPDNIIENVILELKTY*