ggKbase home page

MEL_C3_63_11

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: comp(9966..10481)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF01313 from=8 to=75 evalue=2.1e-16 interpro_id=IPR002191 interpro_description=Bacterial export protein FliQ, family 3 GO=Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fusobacterium sp. CAG:815 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGAATTAATATTAGGTGAATATTTAGCAAAAGGTTTTGCAATAATGTTAATGATATCAATGCCTTGCGTGCTGACAGCCGCCGGAATAGGTTTGGTTGTAGGTATAATAAAAGCCGTAACTCAAGTTCAGGAACAAACAATTGCAGCTGCGCCTAAAATTCTTCTTGTATTTATGGTTATTATAATTTTTGGTGTGGGATTTTTGAAACTTTTAACTAATTTAGTACTTGAAGGTTCAAACCTTGCATTTAACATTATTCCCAAAAATGAAAATTTTGTTTTATCACCAAATTATTTTAAATATACAAAACCTTTTCAAGTTGAAAGTAAAAATATAAAACCTGATTTTATAAATAGTGATGAGAAAGCAGGTAAATTAAATAAATCCGTAAACGAAATACCATATGGTGTAGATAAAGATAAAGAACAAAATATCAAAAGCAATAGACAAGAAAATCCAACACCTAATATTATGGAATGGAAACAAATACTAAAAAATAGACAAGGGCGATAA
PROTEIN sequence
Length: 172
MELILGEYLAKGFAIMLMISMPCVLTAAGIGLVVGIIKAVTQVQEQTIAAAPKILLVFMVIIIFGVGFLKLLTNLVLEGSNLAFNIIPKNENFVLSPNYFKYTKPFQVESKNIKPDFINSDEKAGKLNKSVNEIPYGVDKDKEQNIKSNRQENPTPNIMEWKQILKNRQGR*