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13_1_20cm_3_scaffold_104355_3

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: 1395..2375

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000255|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000255|HAMAP-Rule:MF_01884}; TaxID=379066 specie UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 343.0
  • Bit_score: 223
  • Evalue 3.20e-55
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 343.0
  • Bit_score: 223
  • Evalue 2.30e-55
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 343.0
  • Bit_score: 223
  • Evalue 6.50e-56

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 981
ATGAGTGAACGCCGACGTCCTTTTCGTCGCGGCCGGAGGTCCCGTCCGTCCGGTCATCAACCACATACTCCCTTTGCCGAATCTTCCGGCGATGCGGATCCGTACCTGGATATGGATTCATCTACACCAACACCACTCCCTCCCGCTGACGCCGCACAGCTCCCTGATGCGCGCGACAATATGACCTCACCAGCAATTCCGACAGCGCCCAACACGCCTGCGCCGTCTGCCGACAACAATGCTGATGCCGGCGCCCCACCGGTCAGCAACGGCAGCGAAAACACCGGCACTCAATCGCAACAGCAATCGCAGTACAACCCGCAATCGATGGCCGGTCAGCAAGGCGGCGGAGGCGGTGGTGGTGAGCGCGGACAGGGACAGCAACAACGTGACGGCCATCGCGATAATCGTCACAATGGACGTCGCGGCCGCAATCAACGCGGGCGCAGACAGCGTGGCGGTGGTGGTGGCGGACAAGGACAGGCACAGGGACAACAACAAGGTGGCGGACAACGCGGTGAGCAGCGCGCGCCTCTCGCACCAGTCGTCCCCGATGGTGAAACCATAGGCTGGTTCGATCCACAGCGCGAAGGCGGATTCATTCGCCGATCTGGTTTCAGCTATCTCGCCGAGCCGGGCGATGCGTACGTGCCAACGCAGCTGATTCGGCAGTACACGTTGCGCCGCGGCGATCAGGTTCAGGCGACAACCGGTCACGACCACCGCAATCGCGTCGTCGTCGTCGACGTCCAGAAGATCAACGAGCAGGACCCCGACGCCGCAGCACGCCGTCCCGATTTCGGTTCGCTGATCGCGTCCTATCCGGAGAGAAAACTCAAGCTCGAGACGGGACGTCCCGCCAAGGGCGGACCCGAGCTCACGCGCCGCGCGATCGATCTCATTGCACCAATCGGCTACGGCCAGCGCGCACTGATCGTCGCTCCCGCGCGCGCCGGCAAGACGATGTTGCCGAGGAAGTGA
PROTEIN sequence
Length: 327
MSERRRPFRRGRRSRPSGHQPHTPFAESSGDADPYLDMDSSTPTPLPPADAAQLPDARDNMTSPAIPTAPNTPAPSADNNADAGAPPVSNGSENTGTQSQQQSQYNPQSMAGQQGGGGGGGERGQGQQQRDGHRDNRHNGRRGRNQRGRRQRGGGGGGQGQAQGQQQGGGQRGEQRAPLAPVVPDGETIGWFDPQREGGFIRRSGFSYLAEPGDAYVPTQLIRQYTLRRGDQVQATTGHDHRNRVVVVDVQKINEQDPDAAARRPDFGSLIASYPERKLKLETGRPAKGGPELTRRAIDLIAPIGYGQRALIVAPARAGKTMLPRK*