ggKbase home page

13_1_20cm_3_scaffold_11447_3

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: comp(3280..3762)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 160.0
  • Bit_score: 334
  • Evalue 8.30e-89
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 160.0
  • Bit_score: 323
  • Evalue 1.10e-85
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 160.0
  • Bit_score: 334
  • Evalue 1.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 483
ATGATTGATTTCAGAAGCACGCGCGAGACGCGGGCATCTTCATTCGATTACATCCAGGTTCGGATCGCCTCTCCGGAGGAGATGCGCGGACCGAAGGATCCCAAGGAGCGTGAGCGGCTCGAGATGGCCGGCCTCCGCACCTGGTGGTCGTGGGGCGAGGTCCTCAAGCCCGAGACAATCAACTACCGCTCGTTCAAGCCGGAGAAGGATGGCTTGTTCTGCGAGCGCATCTTCGGTCCGGTCAAGGACTGGGAATGCCACTGCGGTAAATACAAGAGAATTCGCTACCGTGGCGTGATCTGCGATCGCTGCGGCGTCGAAGTCACCCTGAGTCGCGTCCGGCGCGAGCGCATGGGTCACATCGAGCTCGCCGTACCCGTCGCTCACATTTGGTTCTTCAAGACTCTGCCGAGTCCGATGGGGAACCTTGTCGATCTCACGTTGCGTGATCTCGAGAAGGTCATTTACTACTCGAATTACTGA
PROTEIN sequence
Length: 161
MIDFRSTRETRASSFDYIQVRIASPEEMRGPKDPKERERLEMAGLRTWWSWGEVLKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSRVRRERMGHIELAVPVAHIWFFKTLPSPMGNLVDLTLRDLEKVIYYSNY*