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13_1_20cm_3_scaffold_48767_2

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: comp(988..2181)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 398.0
  • Bit_score: 587
  • Evalue 7.40e-165
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:BAH39610.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 398.0
  • Bit_score: 587
  • Evalue 1.00e-164
pilC; type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 398.0
  • Bit_score: 587
  • Evalue 2.10e-165

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1194
ATGGCTACGTTTACATATACCGCGAGAGCATTCAACGGCGATCTTCGCAGCGCCACGATCGACGCTGCCTCGCGCGATGATGTTATTGCACAACTTCGTAAGCAGCGTCTCAGCGTCGTCAAGATCGACCAGGGATCATCTGCGAAAGTCGGTCGCGGCTCCATCAAGACACGCGACGTCGTCATCTTCACTCGTCAGTTCTCGACGATGATCAACTCAGGTCTGCCGCTGGTGCAGGCCTTGACCATTCTCGCTGAGCAGACCGACAACAAGGCGCTGGCTGAAGTCACCAAGAAAGTGGTGTTCGACGTCGAATCCGGTAACACCGTTGCCGACGCGCTGTCGAAGCACCCGCGCGCTTTCACCAATCTTTACGTGAACATGGTCGCCGCCGGTGAAGCCGGTGGTATTCTCGACACGATTCTCATGCGTCTGGCGACATTCCTTGAAAAGAACGACGCGCTTGTGAGAAAGGTGAAGGGCGCCATGATCTATCCCGCTGTCATCATGAGCGTCGCCGCGATCGCGGTAGTAGTGCTCCTCATCTTCGTCATCCCGGTGTTCGAGAATATGTTCGCATCGGTCGGCCTCCCGCTGCCGCTGCCGACCCGTATCGTCATCGGCGCTTCGCGTTTCCTCAAGGGATACTGGTGGATGGTTCTCGCCGTCGCGGTCTCCGGTGCCTACCTCTTCAAGAAGTACTACGCGACCTCCAATGGTAAGCTGGCCATCGACCGCTTGATGCTGAAGATGCCGGTGCTCGGCGACGTGCTCCGCAAATCGGCGGTGTCACGCTTCACCCGTACTCTCGGTACGCTGATCAGCTCCGGCGTCAGCATTCTCGAAGGACTGGAAATCACCGCCAAGACGGCCGGCAACCGCGTCATTCAGGACGCGATCATGGATTCCCGTGCCTCGATCGCCGGCGGTGACACGATCGCCCAGCCGCTGCAGAAGTCGAAGGTGTTCCCGCCGATGGTTATCTCGATGATCGCGGTGGGTGAACAAACTGGTGGTCTCGACGAGATGCTTTCCAAGATCGCCGACTTCTACGATGAAGAAGTCGACGCCGCCGTCAGCAACTTGCTCTCCCTCCTCGAGCCGATCATGATCGTGTTCCTCGGTGTGATAGTCGGCGGCATGGTTGTCGCCATGTATCTGCCAATCTTCGACATGATCAACGCGGTGCAATAA
PROTEIN sequence
Length: 398
MATFTYTARAFNGDLRSATIDAASRDDVIAQLRKQRLSVVKIDQGSSAKVGRGSIKTRDVVIFTRQFSTMINSGLPLVQALTILAEQTDNKALAEVTKKVVFDVESGNTVADALSKHPRAFTNLYVNMVAAGEAGGILDTILMRLATFLEKNDALVRKVKGAMIYPAVIMSVAAIAVVVLLIFVIPVFENMFASVGLPLPLPTRIVIGASRFLKGYWWMVLAVAVSGAYLFKKYYATSNGKLAIDRLMLKMPVLGDVLRKSAVSRFTRTLGTLISSGVSILEGLEITAKTAGNRVIQDAIMDSRASIAGGDTIAQPLQKSKVFPPMVISMIAVGEQTGGLDEMLSKIADFYDEEVDAAVSNLLSLLEPIMIVFLGVIVGGMVVAMYLPIFDMINAVQ*