ggKbase home page

13_1_40cm_scaffold_11679_18

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(11849..13216)

Top 3 Functional Annotations

Value Algorithm Source
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 454.0
  • Bit_score: 467
  • Evalue 3.10e-128
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=12555762 bin=CNBR_ACIDO species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 447.0
  • Bit_score: 458
  • Evalue 5.90e-126
Fis family two component sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 449.0
  • Bit_score: 388
  • Evalue 2.80e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGAAGAACATCCTGGTTGCCGAGGACGACAGGTCCCTGCGCGACGGCCTCGTCCAGTCGATGAGCCGCAGCGGATACAAGGTCCAGGTCGCCCAGTCCGGCAAAGACGCCCTCGAGAAGATCGAAAAGCAGGTGTTCGACCTGGTCATCGCCGGCCAGCGCATGGGGGGCTCCGACGGGCTGGAGATCCTGCGCAAGGCGCGCTCGACCAACGCCGGGACGCTGGTCATCGTCACCGGCGAAAACGGCTCGGGAGCCGTGGAGGCGATGAAGTCGGGCGCCTTCGACTATCTCCAGAAGCCGCTGTCGCTGGAGGCCATCGAGATGAAGGTCCAGAGGGCCATGGAGCACCAGAGGCTGGTGGTCCGCATGGCTTCGATGACCGAGCCGCTGGCCGACCCCTCCGATCGCTACGGCCTGGTCGGCAGCTCCAACGCGATGCGCGAGATCTTCAAGGTCATCGACAAGGTGGCCGCCTCCAACGCCACCGTCCTGATCCAGGGCGAGACCGGGACGGGCAAGGAGCGGGTCGCCGAAGCGATCCACCGCAACTCACCGCGCCACGACGCCGCCTTCGTGCGCATGAATTGCGCCTCGCTGCCCGACAACTTGCTGGAGAGCGAGCTGTTCGGCCACGAGAAGGGGGCGTTCACCGGCGCCGACCAGATGCGCATCGGCCGTTTCGAGATGGCCAACGACGGCACGCTCTTCCTGGACGAGGTCGGGAACATGAGCGCCAACACGCAGGCGAAGGTGCTGCGCGCCATCCAGAACCAGGAGTTCGAGCGCCTGGGCGGCAGCCGCACGATCAAGGTGGACGTGCGCATCGTCGCGGCGACCAATATCAACCTGGAGGCCGCCATCAAGGAAGGGCGCTTCCGCGAGGACCTGTACTACCGGCTGAACGTCGTCACCGTCGCGGTGCCGGCGCTCCGCGAACGCGTGGAGGACATCCAGCCGCTGGCCGAGTACTTCCTGAAGCGCTTCGCCGGCGAGCTGCGCCGCCGCGTGACCGGATTCTCGGCCGAGGCGGTGAGACGTCTGCAGGAATACCGCTGGCCGGGCAACGTGCGCGAGCTCGAGAACACCATCGAGCGCGCCGTGCTGATGTGCGAGGGGGACACCATCCGCCCCGCCGACCTGACCCTCCTCGACCGCGAGCATACGGTCGGCATGACGCCGGCGCTGGCGGTCGACCTGCTGAATCTGGAAGCGCTCGAGAAGACCGCGCTCCTCGAAGCCCTCAAGCGCAGCAACTGGATCCAGAAGGAAGCGGCCAAGATCCTCGGCATCAGCAGCCGGGTGATGAACTACAAGGTCCACAAGCACGGCATCACGCACGACCGCTGGAGCAAGAACCGCAACTAG
PROTEIN sequence
Length: 456
MKNILVAEDDRSLRDGLVQSMSRSGYKVQVAQSGKDALEKIEKQVFDLVIAGQRMGGSDGLEILRKARSTNAGTLVIVTGENGSGAVEAMKSGAFDYLQKPLSLEAIEMKVQRAMEHQRLVVRMASMTEPLADPSDRYGLVGSSNAMREIFKVIDKVAASNATVLIQGETGTGKERVAEAIHRNSPRHDAAFVRMNCASLPDNLLESELFGHEKGAFTGADQMRIGRFEMANDGTLFLDEVGNMSANTQAKVLRAIQNQEFERLGGSRTIKVDVRIVAATNINLEAAIKEGRFREDLYYRLNVVTVAVPALRERVEDIQPLAEYFLKRFAGELRRRVTGFSAEAVRRLQEYRWPGNVRELENTIERAVLMCEGDTIRPADLTLLDREHTVGMTPALAVDLLNLEALEKTALLEALKRSNWIQKEAAKILGISSRVMNYKVHKHGITHDRWSKNRN*