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13_1_40cm_scaffold_2224_15

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(9792..10535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P026_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 228.0
  • Bit_score: 273
  • Evalue 1.90e-70
fliA; RNA polymerase sigma factor for flagellar operon Tax=RBG_13_Deltaproteobacteria_65_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 235.0
  • Bit_score: 257
  • Evalue 2.60e-65
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 238.0
  • Bit_score: 250
  • Evalue 6.40e-64

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Taxonomy

RBG_13_Deltaproteobacteria_65_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGACCGCTGCGGAAAGAGACGCACTGATTAACGAAACGCTTCCGTTGATCAAGCACATTGCCCATCGTGTAGCCACCCGGCTACCCAGTAATATCGAGATGAGAGATCTCATCAATGCTGGCGTTCTCGGCTTGCTTGATGCAGTTGAAAAATTCGAGCCCGAACGCAACGTGAAGTTCAAGACCTATGCCGAGGTTCGCATTCGAGGGGCAATCCTCGACAGCTTGCGAAATCTCGACTGGGCGCCGCGCTCGCTTCGTAAGAAGAGCAAGGATCTGGAAAAGACCTATTCCGACCTCAGCCAGAAGCTGGGCCGTACGGCCACTGACGAAGAAGTGTCCGAGGCAATGGGCGAAAACATAGGCGATTTTCACGCGCTCGTCGATCAGTTACATGGGTTGACGATCGGTTCGTTCGAAAATCTCAGCGACAGTGAGGATAGCGAGAATTACATCAACTACTATCCTGACGACGGCAGCAACGATCCTTACGCAAAATTCGAATCGAATGAGTTGACGAAGATGCTGGCTGAAGCCATTGAAGATCTGCCCGAGAAGGAGCGGCTCGTTCTATCGCTTTATTACTACGAAGAATTCACAATGAAAGAAATTGGCGCTCTCCTCGGCGTAAATGAGTCGCGCGTATCTCAACTTCACACGAAAGCAACGCTTCGTCTTCGCGGAAAGCTTGCGAAAGTCGGTCCCAATGTGGAGGCGATGCTCAGGGGAGTGGCTGCCGGATAA
PROTEIN sequence
Length: 248
MTAAERDALINETLPLIKHIAHRVATRLPSNIEMRDLINAGVLGLLDAVEKFEPERNVKFKTYAEVRIRGAILDSLRNLDWAPRSLRKKSKDLEKTYSDLSQKLGRTATDEEVSEAMGENIGDFHALVDQLHGLTIGSFENLSDSEDSENYINYYPDDGSNDPYAKFESNELTKMLAEAIEDLPEKERLVLSLYYYEEFTMKEIGALLGVNESRVSQLHTKATLRLRGKLAKVGPNVEAMLRGVAAG*