ggKbase home page

13_1_40cm_scaffold_4275_2

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(393..2225)

Top 3 Functional Annotations

Value Algorithm Source
Precollagen-NG n=1 Tax=Mytilus californianus RepID=A9QLN3_MYTCA similarity UNIREF
DB: UNIREF100
  • Identity: 28.1
  • Coverage: 434.0
  • Bit_score: 81
  • Evalue 4.50e-12
Precollagen-NG {ECO:0000313|EMBL:ABW90433.1}; TaxID=6549 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Mytiloida; Mytiloidea; Mytilidae; Mytilinae; Mytilus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 28.1
  • Coverage: 434.0
  • Bit_score: 81
  • Evalue 6.30e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mytilus californianus → Mytilus → Mytiloida → Pteriomorphia → Mollusca → Metazoa

Sequences

DNA sequence
Length: 1833
ATGGACCAAACCTCGCTGCTCGCGCTGCTCTCCGGCCGGGGCCAGGGGATGCCCGAAGGCATACCCCTCGGCGGCCAAGCCTTTCCCACTCCGCTGAGTGGAATCCCATTCGGCGAGCAAGGTATGGGGCTCAGTGGCGGGGGGAGTTCCCTGTCTGGACGCGGTGCCGCGCCGATGGGCGGTGGCGATGCGGGCGGTGGGATTGACCCGCTGATGCTCCAACAACTCATGAGCGCCATCCAGGGCGCTGGCACCGGCGCGGGCCTCACACAAGGTGTTGGGGGCGGCTCGTTGGGTCAATACGGTGGCGGTTACCCGGGCAGTGGAATGGGGTACGGCCAAAGCGGGCCCGCGCCGTCCGGCGTCACCGGCACGAGCCGCGGCACCGCGCAAGCCACCTCGCTCAAGGAAATCTTGGGCGGTGTCTCCCAGCTCACGAAGCTCGCCCAGCAACTCTTCGGCACGGCTTCGCCCCTGACACGCGGTGATGCTGGCGGCACCACGCTGTCAGACCAAATGAGAAGCCAACAGGCTGATGCTGGCACATCGGAACTTGGAGCACCTTCGCCCACCGCGTCGCCCACGGCGGCAGACATATCGCTCTCGGATACATTGCGGGGCAGCAACTACGGTCTTCCATCGCCCACGGCGGGCGGTCCAACGATGGCGCCGAATACGTTTTTGAGTGGCGCAGCGGGGCCAGCGTCGTATGGTGATGTTTTCCTTCCAGCCATGGGCAGTGGCGCCGAGTCCGCGGTCACGGGCGGCCAGCTCGCCACCGGCAGCGGCGCGGGTGGTCCAAGCCCAACAGCGGCACCGTCAGAGACTCCCTCGGGTCTTGGTGCGCTTGGAACGATCGGCACCGGCGCCGCTGGGATTGGCGGACTCTACGAACTCATGCAAGGGATTCAACAGGGACGATCGCTCGAAGCGGCGCGGGGAGGCGTCGGCGCGCTCGGCGCAGCCGGTTCCCTTGGACTTCTGGGTGACGCGAGTGGAGCCGTAGGCACGGCCGCTCCCTATGCGGGCGCGGCGCTCGGCATTGCCGACGTGGCGATGAATCCCAACTTACGCAATGACCAGAAGGCGGCACTGTCAGCCGTTCAAGCGGGTGGTGCCATCGCCGCTCCGTATACGTTCGGCCTCTCTGCGCTCGCACCCCTGGTCCTCAGTGCGATCGTCGGCGGCAAAGGCGGCGCGCCCGGCTGGCTCCGCTATGTGGACCCCATCTTCGGCAACATGATTTATAGCCTTTTCCAGCAAGGCAACTATGCCCCCACGCGAGAGAAAGCGTTTAAAGAGGCTCAAGCCGGGATTGGCGGGCTTGGGAGGGCGTATCAGCAAGCCGCACAGAGCGGCGACCCCGCACAAGTGCTCAAGGCCCTCGGCACCGCGCAAGCGGGCGGACACCTGCGCGCGGGCCTCAACATCTCGCCCGAGATGGCCCAGGCCCTTGGCATGGCGCCCGGTGCCGCCGAGTTCGCCAACGTGTCGCCGGAGCAATTCGGCTCGCTCTTGGGCTACTACGGCAAGAATCCCCAAGCCATCGGCGCGAGCATCACGGGCTCAGGCGACGTGCCCTATATGCCGCAGAAGCAAGCCGTCCAGATCGCTGGCAACATCGCAAGCAACGCGCAGAACGTGATCCGCAACACGGTCATGCGGCAGCAAGTACAAAACTGGCTGCAAGGGCTCCAAGCGCCCGTACCTGCCGCCGCGACACCCGCCCCAGCAGGCGGCATCCCCCCGTCGCTCCTCGCCTTGATGGGCGGTGGTGGTGGCGCCACTCAAGATCCCCTTTTGCTGCAATTAATGTTGCAAGGAGCCGCGTAA
PROTEIN sequence
Length: 611
MDQTSLLALLSGRGQGMPEGIPLGGQAFPTPLSGIPFGEQGMGLSGGGSSLSGRGAAPMGGGDAGGGIDPLMLQQLMSAIQGAGTGAGLTQGVGGGSLGQYGGGYPGSGMGYGQSGPAPSGVTGTSRGTAQATSLKEILGGVSQLTKLAQQLFGTASPLTRGDAGGTTLSDQMRSQQADAGTSELGAPSPTASPTAADISLSDTLRGSNYGLPSPTAGGPTMAPNTFLSGAAGPASYGDVFLPAMGSGAESAVTGGQLATGSGAGGPSPTAAPSETPSGLGALGTIGTGAAGIGGLYELMQGIQQGRSLEAARGGVGALGAAGSLGLLGDASGAVGTAAPYAGAALGIADVAMNPNLRNDQKAALSAVQAGGAIAAPYTFGLSALAPLVLSAIVGGKGGAPGWLRYVDPIFGNMIYSLFQQGNYAPTREKAFKEAQAGIGGLGRAYQQAAQSGDPAQVLKALGTAQAGGHLRAGLNISPEMAQALGMAPGAAEFANVSPEQFGSLLGYYGKNPQAIGASITGSGDVPYMPQKQAVQIAGNIASNAQNVIRNTVMRQQVQNWLQGLQAPVPAAATPAPAGGIPPSLLALMGGGGGATQDPLLLQLMLQGAA*