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13_1_20cm_4_scaffold_105407_1

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: 1..1155

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 384.0
  • Bit_score: 647
  • Evalue 1.40e-182
Lipid A export ATP-binding/permease protein MsbA id=4600885 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 385.0
  • Bit_score: 647
  • Evalue 9.90e-183
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 388.0
  • Bit_score: 408
  • Evalue 2.20e-111

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1155
CTCAACGTGCTGCTGCACGAGGCGCTGGCCGGCACCAAGATCGTCAAGGCCTTCGGCCGCGAGGGCCACGAGGCCCAGCGCTTCGACCGCGTGAATCAGCGACTGCTGGCGCTGGCGCTCAAGGACCACCGGACCGACGAGATCACCGACCCGCTGATGGAGGTGCTGGCCGCGCTCGGCATCATGGGCGCGCTCTGGTACGGCGGCCACCAGGTGATCGCGGGCGCCATGACGCCCGGCGACTTCTTCTCGTTCACGGCCGCCGTCGCCCTGCTCTACGGGCCGGTGCGGCAGCTCTCGCGGATCATGAACACGGTGCAGCAGTCGACGGGCGCCGTCGAGCGCGTGTTCGAGGTGCTCGACACGCCGCCGGCCATCGCCGACCGGCCGGGCGCGCACGCGCTACCGGCGTTCACGCGCGCGCTGGCCTTCGAGGGCGTGTCGTTCCGCTACGGCGGCGCCCCCGAGCCCACGCTGCACGACATCGATCTGGAGGTGCGCCGCGGCGAGGTCGTCGCCTTCGTGGGCATGAGCGGCGCCGGCAAGTCGACGCTGATGGATCTCCTGCCGCGCTTCCACGACGTCAGCGCCGGGCGCATCACGCTGGACGACCACGACCTGCGCGACCTCACGCAGGCCTCGCTGCGCGCGCAGATCGCGCTGGTCACGCAGGACACGTTCCTGTTCAGCGACTCCATCTACTACAACATCGCCTACGGGCGGCCCGACGCGGCGTTCGCCGACGTGGCGCGCGCCGCGCGCCAGGCGCACGCCGAGGAGTTCATCCTCGCCTGTCCCGAGGGCTACGACACGCTGGTGGGCGAGCGCGGCGTGCGGCTGTCGGGCGGGCAGCGCCAGCGGCTGGCCATCGCCCGCGCGTTCCTGAAGGACCCCCCCATCCTCATCCTCGACGAGGCCACCTCCGATCTCGACGCCGAGAGCGAGTTCATGGTGCAGCAGGCGCTGGCCGACCTCATGCGCGGCCGCACCGTGCTCGTCATCGCGCATCGCCTGGCCACCGTGCGCAACGCCGACCGCATCGTCGTCATTCACGAGGGGCGCATCGCCGAGGTCGGCCGCCACGACGAGCTGATCGCGCGGGACGGCCTCTATCGCCGCCTCTACGCGCTCCAGATGGAGGGCATCGCGGGCTGA
PROTEIN sequence
Length: 385
LNVLLHEALAGTKIVKAFGREGHEAQRFDRVNQRLLALALKDHRTDEITDPLMEVLAALGIMGALWYGGHQVIAGAMTPGDFFSFTAAVALLYGPVRQLSRIMNTVQQSTGAVERVFEVLDTPPAIADRPGAHALPAFTRALAFEGVSFRYGGAPEPTLHDIDLEVRRGEVVAFVGMSGAGKSTLMDLLPRFHDVSAGRITLDDHDLRDLTQASLRAQIALVTQDTFLFSDSIYYNIAYGRPDAAFADVARAARQAHAEEFILACPEGYDTLVGERGVRLSGGQRQRLAIARAFLKDPPILILDEATSDLDAESEFMVQQALADLMRGRTVLVIAHRLATVRNADRIVVIHEGRIAEVGRHDELIARDGLYRRLYALQMEGIAG*