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13_1_20cm_4_scaffold_117177_1

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: 2..586

Top 3 Functional Annotations

Value Algorithm Source
livF; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 194.0
  • Bit_score: 275
  • Evalue 7.30e-71
ABC transporter related id=3635567 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 193.0
  • Bit_score: 240
  • Evalue 1.40e-60
LivF; ABC-type branched-chain amino acid transport systems, ATPase component similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 194.0
  • Bit_score: 217
  • Evalue 2.80e-54

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 585
AGCACCACGCTGCGCGTGATCTCCGGCCTCGTGGCGCCCCGCCATGGCCGCGTGCTCTTCGACGGCGAGGACCTGGCGCGGGTGCCCGCGGCCCGGCGCGTCGACCTCGGCATCGTGCAGGTGCCCGAGGGCCGCCGGCTCTTTCCGTTCATGACGGTGACGGAGAACCTGCTGCTCGGCGCGCATACGCGGCGCGCCCGCACCGAGCGGCACGTCACCCTCAGCTATGTCTACCGGCTCTTTCCGGTGCTGCAGGAGCGCGCCGCCCAGCTCGCCGGCTCGCTCTCGGGCGGCGAGCAGCAGATGTGCGCGATCGGCCGCGCGCTGATGGCCCGGCCGAAGCTGCTGATGCTCGACGAGCCCACCCTCGGGCTGGCGCCCGTGCTCGTGGGGCGCATCTTCGAGACCGTGCGCACGATCAACGCCGATGGCGTCACCGTGCTCCTCGTCGAGCAGAACGTCCGTCAGGCGCTGACCCTGGCCACGCGCGCGTGCGTGCTCGAATCCGGCACGCTGGTGCTGCAGGGGGCCGGCCGCGAGCTCCTCGGCGACGAGCGTCTCAAGCGCGCGTATCTGGGATTGTGA
PROTEIN sequence
Length: 195
STTLRVISGLVAPRHGRVLFDGEDLARVPAARRVDLGIVQVPEGRRLFPFMTVTENLLLGAHTRRARTERHVTLSYVYRLFPVLQERAAQLAGSLSGGEQQMCAIGRALMARPKLLMLDEPTLGLAPVLVGRIFETVRTINADGVTVLLVEQNVRQALTLATRACVLESGTLVLQGAGRELLGDERLKRAYLGL*