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13_1_20cm_4_scaffold_28743_3

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(2565..3752)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 330.0
  • Bit_score: 496
  • Evalue 3.10e-137
RNA polymerase sigma-54 factor id=3879943 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 332.0
  • Bit_score: 488
  • Evalue 4.70e-135
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 335.0
  • Bit_score: 248
  • Evalue 3.90e-63

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGCCATCGAAGCGCGCCTCTCCCTCCGGCAGAGCCAGCGGCTCGTCATGACCCCGCTGCTCCAGCAGGCGATCCAACTCCTCCAGCTCTCCACGCTCGAGCTTCAGGACGTCGTGCAGAAAGAGCTCCTCGAGAACCCGCTGCTGGAAGAGGTGCCGGCGGACGGCGGCGAGACCCCGGATGGAGGCGAGGTCGCGCCGAGCGCCGACGCGACGCCGGCGCCGACCGTGGAGCCGATCACCACCGAGCCGCCCCCGACCGCCGAACGGCAGACCGACGACCTGCCGTTCGACCCGATCGCCGTGCTGTTCGACGAACCGGAGGAGCGCTCCCTCGTCGCACAGGAGGAGCGCGAGGACGTCCCGTTCGAGAACTTCGTCCGGTCGGTCTCGTCGCTCGCCGATCACCTCGAGGAGCAGCTCCGCTTCGGCACTGAGGATCCAGCGGCCCGGCGGATCGGCGCCGAGATCATCGGCAACCTCGACGAGGACGGGTACCTCCGGGCGGAGCTCGGGGAGATCGCCCCGCGGTGCGCCGCGACGCCCGAGGAGGTCGAGCGCGTCCTGACCGAGGTGGTCCAGAAGTTCGACCCGATCGGCGTCGGAGCGCGCACGATTCAGGAGTGCCTCCTGCTCCAGCTCCGGTCGAACCCGCCCGTCGACCCGGTGTCCGTCGAGATCATCGAGCGGTACTTTGAGGACCTCAGCCGCCGCCGCTATCAGGACATCGCGCGGGCGCTGAAGCTGCCGGCCGACCGGATCATGGAGTCGGTCGAGGAGATCATGGGGCTCGAGCCCAAGCCCGGCCGTCGCTTCGCCGGGAACGACTCGCGCTACATCGTGCCGGATGTCTACGTCATCAAGGTCAGCGGCGACTACACGGTCGTGCTGAACGAGGAGGGCATCCCGCGCCTCCGCGTGAACGCGCTCTACCGCTCGCTGCTCCGGAGCTCGGGCGACGAGGCCCGCCAGTACGTCGAGCAGAAGCTCCGCGCTCCGGGACGTCGGCGAAGACATCAGCATGCACGAATCCACGATCAGCCGCGTGACGACGAACAAGTACGTCGAGACGCCCCAGGGGCTGTTCGAGCTCAAGTTCTTCTTCCACAGCGGCATCGCCTCGGGCGACGGCGAGATGGTCTCCTCGGTCTCCGTGAAGAAGATGATCCAGGACCTCCTCGCGAATGA
PROTEIN sequence
Length: 396
MAIEARLSLRQSQRLVMTPLLQQAIQLLQLSTLELQDVVQKELLENPLLEEVPADGGETPDGGEVAPSADATPAPTVEPITTEPPPTAERQTDDLPFDPIAVLFDEPEERSLVAQEEREDVPFENFVRSVSSLADHLEEQLRFGTEDPAARRIGAEIIGNLDEDGYLRAELGEIAPRCAATPEEVERVLTEVVQKFDPIGVGARTIQECLLLQLRSNPPVDPVSVEIIERYFEDLSRRRYQDIARALKLPADRIMESVEEIMGLEPKPGRRFAGNDSRYIVPDVYVIKVSGDYTVVLNEEGIPRLRVNALYRSLLRSSGDEARQYVEQKLRAPGRRRRHQHARIHDQPRDDEQVRRDAPGAVRAQVLLPQRHRLGRRRDGLLGLREEDDPGPPRE*