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13_1_20cm_4_scaffold_37828_1

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(2..589)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 193.0
  • Bit_score: 220
  • Evalue 2.20e-54
Arabinose efflux permease family protein id=4221600 bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 213
  • Evalue 2.40e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 188.0
  • Bit_score: 124
  • Evalue 4.20e-26

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCTCGCGCCGCGCTGGCGGGTCGTCGTCGCGCTCTTCACGGTCACCTCGTGCATCGCCACCGCGGTGTCGACGTTCGGCGTCTTCCTCCCCGTGCTCTCGGAGGCCTTCGGCTGGAGCCGCGGGGCGGTGTCGGTCGTGCTGTCGATCAGCCTCGTGCTCGGCGGCGTCGCCGCCTTCCCCGTCGGCCGGATCGCCGACCGGCGGGGCCCGCGCGCGGTGCTCGCCACGACGGTGGCCATCGGCGCCGTCGGCTTCGTGCTCAGCGCGCGCATCGAGGCGCTGTGGCAGCTCTACCTCTCCTACGGCGTGCTCGTCGGCGTCGGGATGTCGTCGATCTACGTGCTGACGGCGGCCACGGTGGCGCGCTGGTTCGAGGCGCGACGCGGGCTCGCGCTGGCCATCGTGCTGAGCGGCTTCAATCTCGGCTGGCTCACCGGCGGGCCGCTCGCCGCGTGGCTGATCGGCCGGTGGGGATGGCGCACCGCCTACGTGACGCTCGGCCTGCTCGTCGCCGCCGTGGGCGTGCCCGTGAGCCTCTACGTGCGCTATCCACGCTCCGCGGAGCCGCGCCGCATGGTGGCGGAC
PROTEIN sequence
Length: 196
MLAPRWRVVVALFTVTSCIATAVSTFGVFLPVLSEAFGWSRGAVSVVLSISLVLGGVAAFPVGRIADRRGPRAVLATTVAIGAVGFVLSARIEALWQLYLSYGVLVGVGMSSIYVLTAATVARWFEARRGLALAIVLSGFNLGWLTGGPLAAWLIGRWGWRTAYVTLGLLVAAVGVPVSLYVRYPRSAEPRRMVAD