ggKbase home page

13_1_20cm_4_scaffold_74394_1

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(1..576)

Top 3 Functional Annotations

Value Algorithm Source
livH; putative branched chain amino acid ABC transporter permease component; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 192.0
  • Bit_score: 231
  • Evalue 9.10e-58
Branched-chain amino acid transport system permease protein LivM id=4166560 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 192.0
  • Bit_score: 233
  • Evalue 2.20e-58
livH; branched chain amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 184.0
  • Bit_score: 193
  • Evalue 4.20e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGAGCAACAAGGTATTCGCCCTCGTCACCCTCGCCGTGGCGCTTGCTCTCGCCGCCGTCACGCAGCTCATCCCGAACGACTATTTCTTCACGGCCGCGTACACGGTGCTGCTCTTCGTGATCCTCGCCACCGCATGGAACATCCTCGGCGGCTACACCGGCTACGTGAATTTCGGATCGGCCGCGTTCTTCGCGATCGGCGCCTACACCACGGTGTTCTTCTACAACGCCTTCAAGGCACCGCTGCCGGTGGGGATCGTCGCCGGGACCCTGGTGGCGGGCCTCGCGGGGCTGGGCCTGGGCTACCTCACGCTGCGCCTGCGCGGCGTGTTCTTCGCGATCGCGTCGCTCGCGCTCGCCGTGGTGCTCTACATCTTCATCGTAAACTGGGACTACGTCGGCGGCGCGCGCGGCGCCTACGTGCTGCAGCCGCGCGAGGTTCCCTTCGGCCTGCCGCGCTACATCCACCTGATCTATGCGGTGCAGCTGGTGCTGGCGGGGTTCGCGCTCGTCGTCGCCCGCGCGATCGAGCGCTCGACCCTCGGCCGCGGGCTCGCGGCGATCCGCGACGACGAG
PROTEIN sequence
Length: 192
VSNKVFALVTLAVALALAAVTQLIPNDYFFTAAYTVLLFVILATAWNILGGYTGYVNFGSAAFFAIGAYTTVFFYNAFKAPLPVGIVAGTLVAGLAGLGLGYLTLRLRGVFFAIASLALAVVLYIFIVNWDYVGGARGAYVLQPREVPFGLPRYIHLIYAVQLVLAGFALVVARAIERSTLGRGLAAIRDDE