ggKbase home page

13_2_20cm_scaffold_12198_4

Organism: 13_2_20CM_Acidobacteria_56_17

partial RP 13 / 55 BSCG 16 / 51 ASCG 4 / 38
Location: comp(2019..2567)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 260
  • Evalue 2.30e-66
Peptide deformylase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLR4_MARHT similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 260
  • Evalue 1.60e-66
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 260
  • Evalue 4.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marinithermus hydrothermalis → Marinithermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCGGTCCAGAAGGTTCGACAACTTGGGGACCCCGTCCTGCGCGAGATGTGCAAAGAAGTACAGGATGCCTCTGCCCCGGGAATTCGCGCGCTGGTCGAGGACCTTGAAGACACGCTTGCCTCTTGGCGCAAGACTACCGGCTATGGACGAGGAATCGCCGCGCCGCAAATTGGAGTTTTGCAGCGCGTGATCTTTTTACGCCTGCCCGGCGAAGACCCGTGGCCTCTCGTGAATCCAAAAATTATCGAGCGCAGCGCCGAACGCATCGTCGTGTGGGACGCCTGCCTTAGTTTCTTGTCCATCTTCATGCAAGTAGAGCGGAATCGCGAAGTCACTGTGCAATATCAAGACCTGCAGGGAACAACGCACGAAGTGCGCGCCGGAGAGCTCCGCGACCTTTCCGAGCTGCTTCAGCACGAAATTGATCATCTGGACGGAATCCTTTGCATCGACCGGGTTACGGACTTGAAGACGGTTTGCACCAAGGAAGAATTTGAAAAGCGATATCGCGCGGAAAGCCCGTACGCTACAAGCGCAAGCCAGTAA
PROTEIN sequence
Length: 183
MAVQKVRQLGDPVLREMCKEVQDASAPGIRALVEDLEDTLASWRKTTGYGRGIAAPQIGVLQRVIFLRLPGEDPWPLVNPKIIERSAERIVVWDACLSFLSIFMQVERNREVTVQYQDLQGTTHEVRAGELRDLSELLQHEIDHLDGILCIDRVTDLKTVCTKEEFEKRYRAESPYATSASQ*