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13_2_20cm_scaffold_38395_4

Organism: 13_2_20CM_Acidobacteria_56_17

partial RP 13 / 55 BSCG 16 / 51 ASCG 4 / 38
Location: 2328..3563

Top 3 Functional Annotations

Value Algorithm Source
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 400.0
  • Bit_score: 497
  • Evalue 2.50e-137
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 410.0
  • Bit_score: 386
  • Evalue 1.20e-104
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 409.0
  • Bit_score: 446
  • Evalue 2.10e-122

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
TTGCCGCAGAGCGAATGGATTTACGATTGGAACATGGCCACGCCGCCGGCGATTCCTGCCGGTACGCGCGTCCTGTTGGATGACGAAACGCTGCGCGACGGTTTGCAAAATCCTTCCGTCTTCGATCCCAATATCGAAGAAAAAATCGAAATCCTGCATCTGATGGAATCCTTGCGAATTGACTCCGTCAATATCGGTCTTCCTGGGGCCGGGCTGCGTGCCTACGCGCACACCGAAGCGCTCGCCCGCGAAATTGCCACGCACCGCATGAAGATCAAGCCCAACTGCGCGGCGCGAACGCATGAAAATGACATGCGTCCCATTGTGGAGATTTCACAAAGCGTGGGCATCCCCATTGAAGCCGCAACGTTCCTCGGCTCCAGCCCGATTCGCCGCCTCGTGGAAGACTGGACCGTCGATCACCTCCAGCGCACGACGGAAAAAGCCGTCAGGTTCGCGGTCGAGAATGGGCTTCCGTCGATGTATGTTACCGAGGACACGATTCGCACGGACCCCGAAACCGTGAAACGCCTTTACTCGACCGCCATTCGAAATGGTGCGCGCGCCATCGTGCTCTGCGACACGGTTGGCCACGCTACTCCGAATGGCGCGTTCAACCTCGTGAAATTTGCCGTCGAAGAAGTTGTGAGGCCGTCCGGCGAAAAGATTCGTATTGACTGGCACGGCCACAACGATCGCGGCCTCTCCATTGCCAATTCGCTGGCGGCCGTAGCCGGCGGCGCCCATCAGGTCCACGCCGCGGCCAATGCTCTAGGCGAGCGCGTTGGCAACACGCCCATGGAATTAATGCTCGTCAATCTTCGCCTCATGGGGCTTATCGAACAGGACCTGTCCCGCCTTAAGGAATATTGCGAAAAAGTCGCGAACGCTACGCACACAAAAATCCCGCCGAACTATCCGGTCGTCGGGCATGACGCGTTTCGCACCGCGACGGGAGTTCACGCCGCCGCGCTCATCAAAGCTTTTCGCAAAAATGATCTGGAACTCGCCAATGCCGTCTACAGCGGCGTGCCCGCGCATCTTTTCGGTCTCGACCAGGTAATCGAGATCGGCCCTATGAGCGGGAAATCCAATGTGCTGTTCTGGCTGGAGAAGCATCGCGTTCCCGCCGATGACGCGACGGTCACGCGCATCTTTGACGCCGCCAAGCAGTCTCCGCGCGTGCTCACCGACGACGAAGTTTTCGCTCTTTGCATCGAGGGCGCACGCAATTGA
PROTEIN sequence
Length: 412
LPQSEWIYDWNMATPPAIPAGTRVLLDDETLRDGLQNPSVFDPNIEEKIEILHLMESLRIDSVNIGLPGAGLRAYAHTEALAREIATHRMKIKPNCAARTHENDMRPIVEISQSVGIPIEAATFLGSSPIRRLVEDWTVDHLQRTTEKAVRFAVENGLPSMYVTEDTIRTDPETVKRLYSTAIRNGARAIVLCDTVGHATPNGAFNLVKFAVEEVVRPSGEKIRIDWHGHNDRGLSIANSLAAVAGGAHQVHAAANALGERVGNTPMELMLVNLRLMGLIEQDLSRLKEYCEKVANATHTKIPPNYPVVGHDAFRTATGVHAAALIKAFRKNDLELANAVYSGVPAHLFGLDQVIEIGPMSGKSNVLFWLEKHRVPADDATVTRIFDAAKQSPRVLTDDEVFALCIEGARN*