ggKbase home page

13_2_20cm_scaffold_49856_5

Organism: 13_2_20CM_Acidobacteria_56_17

partial RP 13 / 55 BSCG 16 / 51 ASCG 4 / 38
Location: comp(4878..5468)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000371DF7E similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 175.0
  • Bit_score: 182
  • Evalue 4.60e-43
AraC family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 191.0
  • Bit_score: 182
  • Evalue 5.00e-43
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 174.0
  • Bit_score: 172
  • Evalue 1.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGTCCAGTGAGAAACACAACTCATGGCGAGTCGGCCTAGGTGCGTTGGTGGTCCTTGTTGGGTGCGTCCTTGTGGCGCGTGCCGAGGTGCCGCGCGGCTGGTTCCTTGCCGGGTCCAAGCCTTCCGAGTTTGAGGCTGGCGTGGACCCTGGGCAGGCATATCAGGGTCACAGAAGTGCGTACCTGAAGAGCAAGCAACTGAGCGTCGATGGGTTCGGCACGCTGATGCAACAGTTCACGGCGGAACAGTATTTAGGCAAGCGAGTGCGGCTGAGTGGAGTGGTGAAGTCGCAAGAAGTCGCAGAGTGGGCGGGGCTATGGCTACGCGTGGACAAAGGAAAGGAAATGGTCGCCTTTGACAACATGCAAGACCGGGCAATCAAAGGCAGGACGGATTGGCGGCGCTACGAGGTAGTTCTTGACGTACCGAAGGATGCATCTGGCATCGCGCTAGGGATTTTGTTAACCGGAACTGGGGAAGTCTGGCTGAATGGCGCAAGATTCGAGGTGGTAGGCCCAGATGTTGCCGTAACGGGTTCCAGTAATGCAAAGACTCCCGACAAACCTGTGAACTTGGATTTCGCTGAGTAA
PROTEIN sequence
Length: 197
MSSEKHNSWRVGLGALVVLVGCVLVARAEVPRGWFLAGSKPSEFEAGVDPGQAYQGHRSAYLKSKQLSVDGFGTLMQQFTAEQYLGKRVRLSGVVKSQEVAEWAGLWLRVDKGKEMVAFDNMQDRAIKGRTDWRRYEVVLDVPKDASGIALGILLTGTGEVWLNGARFEVVGPDVAVTGSSNAKTPDKPVNLDFAE*