ggKbase home page

13_2_20cm_scaffold_80562_2

Organism: 13_2_20CM_Acidobacteria_56_17

partial RP 13 / 55 BSCG 16 / 51 ASCG 4 / 38
Location: 226..1158

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P108_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 304.0
  • Bit_score: 158
  • Evalue 8.70e-36
ALS operon regulatory protein {ECO:0000313|EMBL:ERI15698.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. E similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 294.0
  • Bit_score: 155
  • Evalue 1.30e-34
LysR substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 305.0
  • Bit_score: 153
  • Evalue 7.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ochrobactrum sp. EGD-AQ16 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGAGCTCCGCCATCTCCGCTACTTCGTCGCCGTCGCCGAGGAGCGGAGCTTTGTCAACGCCGCCCGCCGCGTGCGTGTCGCACAACCCGCCATATCGAAACAGATCCACGACCTCGAAGGGGAGCTGGGCGTGGCCCTGTTCCATCGGCTCCCTCGTGGCGTGCGACTGACCCGCGCCGGCGAGACGTTCCTCGTGGACGCTCGGAGAACCCTGGACGCGGCGGAGCACGCGGTGGTCAGCGCCCGCGGCGCGGCCGAGGGTGGAGTGTCGGATCTGGCGTTTGCGCACGGCGAGCTCGCGGTGTACACACCGATCATCGAAGACCTGCTCGCCGCGTTTCGGGCCGCTCATCCCGAGGCGCGGGTTCGCGTGTCGAGCAAGAGCGACGCGGACACCTACCAAGCGCTGCGCGAGGGGCAGGTCGACGTGGCCTCTATCTTCATCGCCGAGTGGCCCGTCGCGGGGTTCGATGCGATGCGCTTGGTCGATTGTACGACCAAAGGGGTGTTGTTGCCAGCGAGCCATCCGCTCGCAGCCCGGCCCTCCGTGCGGTTGGAGGAGCTCCGGAGCCTCACGTGGCTCCAGCCCGCTCCACAGCGGTGGCCCGGCTTCATCCGGACGATGCGGGAGGCGCTGCGGGACCGCGGCTTGGTCCCGGTGCGGAGTCGTGAACGCTCCAAGGAATCGCCGACGGCAAACGTTCACATCGCTGCCGGCGACACCTGGGCGCTGGCGACCGAGGCGATCGCGGCCCCCTACCGCACGGCGCCGACGGCGATCGTGTATCGTCCCTTTGTCGAGGCGCCGATTCCGTGTTGGATCGCGCTCGTCTGGCGCTCCAAAGCGCCACCGCTCGTGCGCAAACTCATCGATGTCGCGCGCACGATGGCCGATCACATCGAGGACCGCGTCGGCGCGCGAATTGCCTGA
PROTEIN sequence
Length: 311
MELRHLRYFVAVAEERSFVNAARRVRVAQPAISKQIHDLEGELGVALFHRLPRGVRLTRAGETFLVDARRTLDAAEHAVVSARGAAEGGVSDLAFAHGELAVYTPIIEDLLAAFRAAHPEARVRVSSKSDADTYQALREGQVDVASIFIAEWPVAGFDAMRLVDCTTKGVLLPASHPLAARPSVRLEELRSLTWLQPAPQRWPGFIRTMREALRDRGLVPVRSRERSKESPTANVHIAAGDTWALATEAIAAPYRTAPTAIVYRPFVEAPIPCWIALVWRSKAPPLVRKLIDVARTMADHIEDRVGARIA*