ggKbase home page

13_1_40cm_4_scaffold_1434_7

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 4685..5737

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 315.0
  • Bit_score: 360
  • Evalue 3.10e-96
Sigma-54 dependent DNA-binding response regulator id=2868271 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 318.0
  • Bit_score: 349
  • Evalue 3.00e-93
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 340.0
  • Bit_score: 343
  • Evalue 6.10e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1053
GTGAAGGCCGCGATCCAGCCGATGCGAGCGCGCTGGCGTCGTTCGCGCGACGATTTCGACCGCGCGCCGGACCGTTCGGACGCCAGTCGCGCCCGGGACATCGTGGGCGCCTCCGCGCCGATGCGCGAGGTGTTCGAGACGGTCGCGCGCGTGGCCCGCACCCGGAGCACCGTGCTGATCCAGGGGGAGACCGGGACCGGGAAGGAGCTGATCGCGCGGGCCATCCATGCGGCGAGCCCGCGAGCCGATCGCCCATTCGTGCCCGTCGACTGCAGCGCCCTGGCCGAAGGCGTGCTGGAATCCGAGCTCTTCGGGCACGTGAAGGGCGCCTTCACCGGAGCGGTGATCGACAAGCGTGGGCTCTTCGAGACGGCGCACGCCGGCACCTGCTTTCTCGACGAGATCGGCGAGATCAGCGCGTGCGTCCAGGCGAAGCTCCTCAGGGTCCTCCAGGAGCACGAGGTCAAGCGTGTGGGAGGCACCGGGAGCTTCGGGGTGGACGTCCGGGTCATCGCCGCCACCAACCGCGATCTCGGGGCGCTGGTGGCGAGCGGGAGGTTCCGGGAGGATCTCTTCTATCGTCTGAGCGTGGTGACGCTCCACCTACCGCCGCTGCGGGAGCGACGCGAGGACATCCCGGTCCTCGCCATGCACTTTCTCAGGCGGTATGCCGCCGAGAACGCCAAGCCCGTGTCCGACATCGCTCCCGAGACCATGGCTCTGCTGGTCGCGTACGACTGGCCCGGGAATGTCCGCGAGCTGGAGCACGCCATCGAGCGCGCGATCGCGATGACGACGAACCCGGTGCTCCGCCCCGAGGATCTGCCGCCGAAGTGTGTCGAGACGGCGGGCGCGTCGGGTGGGGCGACCGTGGCGTCGTCCCTGAGCCTGCGCGGGGTTGTCACGCGCCACGTCCATCGGGTCCTGCGCGAGGCGCGGTGGAACAAGAAGCTCGCCGCCCAGCTCCTGGGGATTCACCGGCGCACGCTCTACCGGCTGACGAAGCGCTACGGGATCAGCTTGAGCGAGCGTGAGCGTGAGCGGCGCGAGTGA
PROTEIN sequence
Length: 351
VKAAIQPMRARWRRSRDDFDRAPDRSDASRARDIVGASAPMREVFETVARVARTRSTVLIQGETGTGKELIARAIHAASPRADRPFVPVDCSALAEGVLESELFGHVKGAFTGAVIDKRGLFETAHAGTCFLDEIGEISACVQAKLLRVLQEHEVKRVGGTGSFGVDVRVIAATNRDLGALVASGRFREDLFYRLSVVTLHLPPLRERREDIPVLAMHFLRRYAAENAKPVSDIAPETMALLVAYDWPGNVRELEHAIERAIAMTTNPVLRPEDLPPKCVETAGASGGATVASSLSLRGVVTRHVHRVLREARWNKKLAAQLLGIHRRTLYRLTKRYGISLSERERERRE*