ggKbase home page

13_1_40cm_4_scaffold_1497_6

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 3409..5061

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 561.0
  • Bit_score: 501
  • Evalue 9.70e-139
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 571.0
  • Bit_score: 640
  • Evalue 2.40e-180
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 568.0
  • Bit_score: 546
  • Evalue 7.40e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1653
ATGCGCACGATCCGCTCACGACTGATCGCCATCGGCGGGCTGCTGGCGCTCGCGGTGTGGCAGCTGATCCCCACCGACGTCACCCAGCGGGTGCGGGACGCGACGACCGGCCGCATGAAAGACACTACGATCCGTCGCGTGCCGATCAACCTCGGGCTCGACCTGCAGGGCGGGATTCACCTGGCCCTCGAAGTGGACCAGTCAAAGGGTCCCGTGCCCGACTGCGCCACCGCTATCCAGCTCGCCGAGAAGGTGGTGCGCACGCGGATCGACGAGTTCGGCACCAGCGAGCCCGTGGTGCAGATCCAGGGGCGCTGCCGCCTCATTGTCGAGCTGGCGGGTGAAAAAGACCCGGCCCGCGCCAAGGGCATCATCCAGCGCACGGCGTTCCTGGAATTCCGCATCACCGACATGAAGAACCTGTTCCGCGACGCGCTGCCCGAGATCGACAAGGCGCTGCGCCGGGCCGGCGTGCGGGCGCCGGGGCAGGGTGCGGCGGCGGCGAGCGTGACCCAGCTGTTCGGCGCGGACACCGGCAAGGCGAAGGGGAAGACGGCGAAGGGCAAGGCGGCGGCGAAGGATACCACCGACCTCAACGCACCGGACCCCCTGTCATCGCTCCTCTTCCAAGGCCAGCTGCCCGGCGAGTATCTCGTTCCGGAAGAGCAGGTGCCGGTGGCGGAGAGCCTGCTGGCGCGGCCCGACGTGCAACGGCTCATCCCGCGCGGAATCGAGCTGCGGTGGGGTACCGAAGTGTTGTCGCGCGCGGGCCGCAGCTACCGGACCTTGTACGCTGTCGAGGACCGGCCGATCATCACGGGCGAATACCTCCAGGACGCGAAAGCCCTGCGGGACCCACTCACCAACCAATCGGTCGTGAACTTCGTGCTGTCACGGGGTGGCGGGCGCATCTTCGAGCGGGAGACCGGCCGGCACGTGACCGACTACATGGCGATCATCCTCGACGGCCGCGTGCAGGGCCAGCCGCCCGTCATCAAGAGCCAGATCGGCCAGCGGGGGCAGATCGAGCTGGGCGCGAAGCCGCTCCAGGACGCCCAGGACCTGGCGCTGGTGCTCAAGGCGGGGGCGCTCCCCGCTCCCCTCACGATTATCGAGGAGCGTACGATCGGACCGTCGCTCGGCCGGGACTCGATCAGGGACGGCATCCGTGCCGGCATCGTCGGCGTGGCCCTCGTCGTGCTGATCATGGTCACCTACTACCGCCTGTCGGGCGTCCTGGCCGTCGCGGCGCTTGCTCTGTACGTCGTCTTCACGCTCGCCGGGCTTGCGGGGTTCGGGTTCACGCTCACGCTGCCGGGGCTCGCCGGACTCGTGCTGTCGGTCGGCATCGCCGTCGATGCGAACGTGCTGATCTTCGAGCGCATCCGCGAAGAGCTGCAGCACGGGAAGCTGGTGCGCACTGCCGTGGACGAGGGGTTCCTGCACGCCATGAGCGCCATCATCGACTCGAACGTGAGCACGGCCCTCACCGCCTTCATTCTCTACCTGGTCGGGACCGGCCCGGTACAAGGATTTGCGATTACCCTGATCATCGGTATCGCCGCGTCGATGATCACGGCCATCTTTGTGGTTCGCACCTTCTACATGATCTGGCTCGACCGCCGGCCGGACATGGCCACCCTGAGCGTCTGA
PROTEIN sequence
Length: 551
MRTIRSRLIAIGGLLALAVWQLIPTDVTQRVRDATTGRMKDTTIRRVPINLGLDLQGGIHLALEVDQSKGPVPDCATAIQLAEKVVRTRIDEFGTSEPVVQIQGRCRLIVELAGEKDPARAKGIIQRTAFLEFRITDMKNLFRDALPEIDKALRRAGVRAPGQGAAAASVTQLFGADTGKAKGKTAKGKAAAKDTTDLNAPDPLSSLLFQGQLPGEYLVPEEQVPVAESLLARPDVQRLIPRGIELRWGTEVLSRAGRSYRTLYAVEDRPIITGEYLQDAKALRDPLTNQSVVNFVLSRGGGRIFERETGRHVTDYMAIILDGRVQGQPPVIKSQIGQRGQIELGAKPLQDAQDLALVLKAGALPAPLTIIEERTIGPSLGRDSIRDGIRAGIVGVALVVLIMVTYYRLSGVLAVAALALYVVFTLAGLAGFGFTLTLPGLAGLVLSVGIAVDANVLIFERIREELQHGKLVRTAVDEGFLHAMSAIIDSNVSTALTAFILYLVGTGPVQGFAITLIIGIAASMITAIFVVRTFYMIWLDRRPDMATLSV*