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13_1_40cm_4_scaffold_1557_25

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(19364..19879)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 158.0
  • Bit_score: 202
  • Evalue 4.10e-49
RNA polymerase sigma-70 factor, ECF subfamily protein id=2884815 bin=GWC2_Methylomirabilis_70_24 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 158.0
  • Bit_score: 200
  • Evalue 1.10e-48
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 103
  • Evalue 5.20e-20

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGAGGGTGGTCCGAGCTATGACGACCTGTTCGACGCGCATGCCCGGCGTCTTCAGCGCCTGTGTCGGCTGTTGCTCTCGGACCGCGAGGAGGCGGAAGAAGTGGTCCAGGAAGTCTTCCTGAAGCTCCACAAGGCGCAGGACCAAGGCGCGGCGCCTACCTCCTGGGGAGCCTGGCTCACCCGCGTGGCCGTCAATCTCTGTCACGATCGCCGGCGCGCCGGCTGGTGGCCACGCTGGCGGTTTCGAACCGATCGCATCGAGGATGTGGGGCTGGTCGCACGCGAGCCCAATCCCGAAGAAGCCGCGATCGGGGAAGAGACGCTGCGACGGATCTGGACCGCCTTCCGCCGGCTGTCCGACCGTCAGCGCGAGGTCTTCGTCCTGCGTCACCTCGAAGGCTGGACGACCGAAGAAGTCGCCACCGCGCTCGGTCTCCGCACGGGCAGTGTGAAGAGTCATCTCTTCCGGGCGGTGCGCGAGCTGCGAGCGGCCGCCGGCCGGAGCTTCCGATGA
PROTEIN sequence
Length: 172
VEGGPSYDDLFDAHARRLQRLCRLLLSDREEAEEVVQEVFLKLHKAQDQGAAPTSWGAWLTRVAVNLCHDRRRAGWWPRWRFRTDRIEDVGLVAREPNPEEAAIGEETLRRIWTAFRRLSDRQREVFVLRHLEGWTTEEVATALGLRTGSVKSHLFRAVRELRAAAGRSFR*