ggKbase home page

13_1_40cm_4_scaffold_2820_12

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 10146..10706

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 184.0
  • Bit_score: 345
  • Evalue 5.50e-92
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit id=24540625 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 188.0
  • Bit_score: 343
  • Evalue 1.50e-91
4Fe-4S ferredoxin similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 2.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCCGACGTGTGCAAGCACTGCGCCGACGCGGGCTGCCTGAACGCGTGCCCGACCGGCGCGATCTACCGGACCCAGTACGGGACGGTCAACATCAACCAGGACGTCTGTAACGGGTGCCGCTACTGCGTCTCGGCGTGCCCGTTCGGCGTGGTCAGCTTCAACGAGAGCACCGGGACGGCCAAGAAGTGCACTTTCTGCAACGACCGCATCCACAACGGGCTCGGCCCGGCGTGCGCGAAGGCGTGCCCGACCGAGTCGATCCAGTTCGGCTTCCGCGACGATCTGGTCCCGAAGGCGCAGAAGCGCGTCGAGACGCTCAAGGCGATGGGATTCAAGGACGCACAGCTTTACGGCGCCGACTCGGCCGGCTTCCTCGGCGGCCTGAACGCGTTCTTCCTCCTCCTGTCCAAGCCGTCCACGTACGGGCTACCGGACAATCCCAAGCTCCCGCAGAAGAACATCTTCGTGGACTCGCTCCTGTCGATCGGCTCGGCGCTGCTCGTCGGGCTCGGCGCGCTGGTCGCCTTCCGTCGGCGCGGCCCGGGCGGGGAGAGCTAG
PROTEIN sequence
Length: 187
MSDVCKHCADAGCLNACPTGAIYRTQYGTVNINQDVCNGCRYCVSACPFGVVSFNESTGTAKKCTFCNDRIHNGLGPACAKACPTESIQFGFRDDLVPKAQKRVETLKAMGFKDAQLYGADSAGFLGGLNAFFLLLSKPSTYGLPDNPKLPQKNIFVDSLLSIGSALLVGLGALVAFRRRGPGGES*