ggKbase home page

13_1_40cm_4_scaffold_456_25

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(23805..24200)

Top 3 Functional Annotations

Value Algorithm Source
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 121.0
  • Bit_score: 130
  • Evalue 1.40e-27
diguanylate cyclase Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 134.0
  • Bit_score: 114
  • Evalue 1.10e-22
GAF sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 132.0
  • Bit_score: 111
  • Evalue 1.90e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 396
ACGGCGCAACCGCTCGCCGTGGTGCTGCTCGATCTGGACGGCTTGAAGCAGATCAACGACCGCCACGGCCATCTCGCCGGCAGCCTGGCGATTCGCCGTGTTGCCGAAGCGTTGCTGGGGTCGTGCCGGGCCACCGATACTGCGGCGCGCTTCGGCGGTGACGAATTCGCGCTCGTGCTGCCGGAGACCGGGGAGGCGGCCGCGTGGCACGTGGCCCGTGGCGTGGCGGACCGGCTGGCGACGGACGCCGAGAAGCCGAACTTGTCGATCAGTGTCGGGGTAGCCGTCTACCCCGGCCACGGCGAGACGGTGGAGGCCCTCCTAAACTCAGCCGATGTCGCATTGTACGAGACGAAGGAACGTCGCAAGAGCAGGGCCTCAGGGCTTGCTCCCTAA
PROTEIN sequence
Length: 132
TAQPLAVVLLDLDGLKQINDRHGHLAGSLAIRRVAEALLGSCRATDTAARFGGDEFALVLPETGEAAAWHVARGVADRLATDAEKPNLSISVGVAVYPGHGETVEALLNSADVALYETKERRKSRASGLAP*