ggKbase home page

13_1_40cm_4_scaffold_96_36

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(35149..35478)

Top 3 Functional Annotations

Value Algorithm Source
beta-lactamase; K07576 metallo-beta-lactamase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 72.0
  • Bit_score: 96
  • Evalue 2.60e-17
Putative exonuclease of the beta-lactamase fold involved in RNA processing id=4621859 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM17 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 72.0
  • Bit_score: 93
  • Evalue 1.20e-16
RNA-metabolising metallo-beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 95.0
  • Bit_score: 72
  • Evalue 6.20e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACCGCCACGCTCACGTTCCTGGGCGCCACCCCGAGGAGCATGACCCCGGCGATGACGCAGCTCACCGCCGAAGGCAAGCGGGCGTTCGTGCCGTCGCGCTTTCATCTGTGCCCCACGTCCGACGACTCGAGGAAGCTGAACGGTGTCGCGGGCCCGGGGGTCATCATCGCGGGGAGCGGCATGGCGACGGGAGGCCGAATCCTCCACCACCTCCGCCATCGTCTTCCCGACGAGGCCTCGGCCGCCGCCGCCCTTCGGGCCGCCATCGAGCAGCATCTCGGGTGGCGATGCGCCGTCGCCGCCGACTGCCAGCAGATCGACCTCTGA
PROTEIN sequence
Length: 110
MTATLTFLGATPRSMTPAMTQLTAEGKRAFVPSRFHLCPTSDDSRKLNGVAGPGVIIAGSGMATGGRILHHLRHRLPDEASAAAALRAAIEQHLGWRCAVAADCQQIDL*