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13_1_40cm_2_scaffold_122_26

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 24435..25307

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 286.0
  • Bit_score: 419
  • Evalue 3.30e-114
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 292.0
  • Bit_score: 383
  • Evalue 3.70e-103
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 293.0
  • Bit_score: 372
  • Evalue 1.00e-100

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGAAGGACACGCATGGCTGGTGGAGCGATTCGAGGAGAACCGGAGTCACCTCCGGGCCGTCGCCTACCGCATGCTCGGCTCGCGGACCGATGCGGACGACGCCGTCCAGGAAGCCTGGATTCGGCTCAGCCGCGCTGACACGAGCGGAGTCGAGAACCTCGGGGGCTGGCTGACGACGGTCGTCGCCCGGGTGTGCCTGGACATGCTGCGCTCACGCAAGGTGCGGCGCGAGGAGCCCCTGGGCGCGCACGTGCCCGAGCCGACCGTGAGCCGCGAGGACCGGACCCACCCCGAGCATGACGCGCTCCTGGCCGACTCGGTCGGCCTCGCGCTGCTCGTGGTGCTCGAAACCCTGGCGCCCGCCGAGCGGGTCGCGTTCGTGCTGCACGACATGTTCGACCTCCCGTTCGACGAAATCGCTCCCATCGTGGGACGCTCCCCGGCCGCGGCACGGCAGCTCGCGAGCCGCGCGCGCCGCCGCGTGCAGGGAGTGACGGCTCCTGACGTCGATCGCACGCGCCAGCGAGCCCTCGTCGGCGCCTTCCTTGCCGCCTCGCGCGACGGCGACTTCGAGGCGTTGCTCGCTGTGCTCGACCCCGACGTCCTGGTCCGGGCCGACGCCGAAGCCGTGCGAATGGGCGCGTCGGCGGAGGTCCGCGGTGCGCCGGCGGCGGCCGACACCTTCAAGGGACGCGCCCGGGCCGCACAACCGGCGCTCGTGAATGGCGCCGCGGGCCTCGTGTGGGTTGCGGGCGGACGGCCGCGTGTGGTGTTCGAGTTCACGACTGCGGGCGGGAAGATCGTCGCGATCGACCTGGTCGCCGACCCCGAGCGTCTCGGCCAGCTCGACCTAGCGGTGCTCGACGGATGA
PROTEIN sequence
Length: 291
MEGHAWLVERFEENRSHLRAVAYRMLGSRTDADDAVQEAWIRLSRADTSGVENLGGWLTTVVARVCLDMLRSRKVRREEPLGAHVPEPTVSREDRTHPEHDALLADSVGLALLVVLETLAPAERVAFVLHDMFDLPFDEIAPIVGRSPAAARQLASRARRRVQGVTAPDVDRTRQRALVGAFLAASRDGDFEALLAVLDPDVLVRADAEAVRMGASAEVRGAPAAADTFKGRARAAQPALVNGAAGLVWVAGGRPRVVFEFTTAGGKIVAIDLVADPERLGQLDLAVLDG*