ggKbase home page

13_1_40cm_scaffold_108659_1

Organism: 13_1_40CM_Deltaproteobacteria_57_7

megabin RP 49 / 55 MC: 37 BSCG 48 / 51 MC: 38 ASCG 14 / 38 MC: 10
Location: comp(3..224)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:GAK57970.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 70.0
  • Bit_score: 84
  • Evalue 7.00e-14
Lipoprotein releasing system, transmembrane protein, LolC/E family id=4042547 bin=GWC2_Proteo_65_14_Ab886 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 70.0
  • Bit_score: 83
  • Evalue 1.10e-13
lolE-1; lipoprotein release ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 64.0
  • Bit_score: 81
  • Evalue 9.10e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium UASB270 → Bacteria

Sequences

DNA sequence
Length: 222
ATGCCCTACGAACTTTTCATTGCCCTCCGCTATCTTCGCGCCAAGCGCAAGCAGGTGATGATTTCAGTCATCACGGTTATCGCGGTCTCTGCAGTGGCGGTCGGCGTTGCATCGTTGATCATAGTGCTGGCGATGATGACCGGTTTCCGGCGGGAGGTCCAGGCCAAAATTCTATCCCGCACTGCTCACCTCAACCTAACTCATAAAGAGCGCCGCCCGATT
PROTEIN sequence
Length: 74
MPYELFIALRYLRAKRKQVMISVITVIAVSAVAVGVASLIIVLAMMTGFRREVQAKILSRTAHLNLTHKERRPI