ggKbase home page

13_1_40cm_3_scaffold_376_4

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 2575..3036

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein id=24457717 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 6.20e-59
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 153.0
  • Bit_score: 234
  • Evalue 8.60e-59
binding-protein-dependent transporters inner membrane component similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 153.0
  • Bit_score: 218
  • Evalue 1.30e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 462
ATGCTGCCGATGTTCCTGGAGCTGCGGCAGCTGGGGCTCATCAACACCCTGTTCGGCGCGATGATCCCGGTGCTGGCGCCGATCTACGGCGTGTTCCTGGTGCGCCAGTACGCCCTCTCGATTCCCGATGATCTGCTCAACGCCGCGCGGCTCGACGGCGCAAGCGAGCTCAGGATCTTCCGCGCGATCGTCTTCCCCACGATCGCACCCGTGCTCGTCACGCTGGGCGTGTTCACATTCCTCTCCGCCTGGAACGACTTCATGTGGCCGCTCATCGTGCTGAGCGACGATGCGCGCTACACCCTGCCGGTGGCCCTCGCCAACCTCGCGGGCGAGCACGTGCAGGACGTGGAGCTGATGATGGGGGGGGCCGTCGTGACCGTGCTGCCCGTCTTCCTCGCCTTTCTGTTCCTGCAGCGCTACTACATCCAGGGCATCATGGCGGGGAGCACCAAGGGATGA
PROTEIN sequence
Length: 154
MLPMFLELRQLGLINTLFGAMIPVLAPIYGVFLVRQYALSIPDDLLNAARLDGASELRIFRAIVFPTIAPVLVTLGVFTFLSAWNDFMWPLIVLSDDARYTLPVALANLAGEHVQDVELMMGGAVVTVLPVFLAFLFLQRYYIQGIMAGSTKG*