ggKbase home page

13_1_40cm_3_scaffold_53_5

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(12099..13871)

Top 3 Functional Annotations

Value Algorithm Source
Parallel beta-helix repeat (Two copies) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TF47_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 299.0
  • Bit_score: 124
  • Evalue 2.60e-25
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 23.9
  • Coverage: 566.0
  • Bit_score: 111
  • Evalue 8.50e-22
Cell surface protein {ECO:0000313|EMBL:AKB25407.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 275.0
  • Bit_score: 107
  • Evalue 6.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina sp. MTP4 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1773
ATGCACTCGAGGATTTTCGCGAGAACACTTCTGCTGTTCAGCATGATCTTACTCTTGGCCTCTTTTCCGCACTCGTCGTTCTTTGTCCGGTCGAATCCAAACACACTTCATGTTCCGCAGGACTACGCGACGATCCAGGCAGCGGTGAACGCTGCCAGCTCAGGCGATACTATCATCGTCTCTCCCTCGCCTTCGGGAACCTATCCGGGAAACATTACTATCAACAAGAGCCTGACGTTGATGGGTATCTCCGCCAAATCGGTGATCATAAACGCATCTAACATTGGTCCCGGCATAATCATCAACGCTACTGGCAAAGTCTCGGTTTCCCAACTCACTGTACAAGATCCTGATTCGTTCAGTAACGGGATATCGATACTATCCTCCTTGGACGTGACTGTGACGGGCGTTGTTGTCAAGTCGACTGTTTCACAAACCGGGTCGAATGGTACCTGGGTTTCGAACTCGAACAATGTGATTCTGAGAAACAATACGATTACGGGGAACCTTTACGGTGTGGCCGTCCAAGGCGGTTTCAGCAATACAATCCAGGCGAACAATCTTACTCTGAACCATGCTGCTGGCGTGCTCCTGGCCGGTGCAACGGGAAACCAGATCAAGAACAATTACTTGAGCAAATCCCAGTCGGGAATCGACGTCTGGTATGGTTCCACGGGAAACGTCGTGGCGAATAATCCTGCGATCGCGAACAACAGCCTTGCGGGAATATATATTTCAGGATCCAGCGCCAACCAGATAATAGCGAATAATATTGACTTCAATAATTCAACATCCACCTCTACGGGAGTTTACTTGTCAGCCACTTCTGGAAACAGTTTCTACTACAACAACATTAGACACAATTCTATCCAGGTTTTCGGCGTCGGTAGCTCGGACCTAACCGCTAACTACTGGAACGATGGAGCCACTAGCAAACAGGGAAACTTTTGGAGTTTCTACCCAGGGGTTGATGATGGGTCAGGAGGTAGGCCCGCGGGCGACGGTGTCGGGGACACCTACCTTCCATGGCCTTGTCCTAGCGGTGGAAGACCTTGCTCGGTTACTGGTCCTGCAGGGGTCGACTATTATCCTCTCATGCTTCCAGTTAAGCCGCCTACCCTGAACGTTACGGCTATTGCGAGGCCTTTGAGCGGCTGCTCCCTGCCCATTCCCCTGCGGGTTAATTTCACAAGCTCTGCAACAGGCGGTTCCCCGCCTTACTCGTACTCTTGGAAGTTTGGCGACGGGAACACAGGAACGACGCAGAACGCTACTCATGCATACTCGGCTAGGGGAGTCTTGCGCGCCACGGTTACGGTGAATGATACTTCGCTCCCCAGCAATTCGGCAACCGATATCGTGAACATACTCTCTTTCTCCGGCGGTCTTTCGCTAAGTGTTCTCGACGACGCTAAGAACGTGGTTGCCGGTGCTAACGTGACTTCACTGTCTCAACCGCCCGGCCAGGCGAGGTTGAACAAGGCAACGAATTCAACAGGGTCTGTCCTAGTTCCATGTCTGCCGCCTGGCTCCTATAGGATTCAACTGTCCAAGCAGGGATACGAGACCGTGCTGACGACGATTACAATCGCGAATTCTACCATTATCCAGAGCGTGACGCTTGTCGGGGTTCAAAACGCTTTCCCATTGGCCCTACTGGAATACGCGGGAGTTGGAATCGCGTTAGCTGTTATTCTGGTGGCGGGGTCGTTTCTGTGGCGCCGGTCAAAGCGCGGAAAAAGGACTGCTCAGACTCTGCAGACGAAACCATAA
PROTEIN sequence
Length: 591
MHSRIFARTLLLFSMILLLASFPHSSFFVRSNPNTLHVPQDYATIQAAVNAASSGDTIIVSPSPSGTYPGNITINKSLTLMGISAKSVIINASNIGPGIIINATGKVSVSQLTVQDPDSFSNGISILSSLDVTVTGVVVKSTVSQTGSNGTWVSNSNNVILRNNTITGNLYGVAVQGGFSNTIQANNLTLNHAAGVLLAGATGNQIKNNYLSKSQSGIDVWYGSTGNVVANNPAIANNSLAGIYISGSSANQIIANNIDFNNSTSTSTGVYLSATSGNSFYYNNIRHNSIQVFGVGSSDLTANYWNDGATSKQGNFWSFYPGVDDGSGGRPAGDGVGDTYLPWPCPSGGRPCSVTGPAGVDYYPLMLPVKPPTLNVTAIARPLSGCSLPIPLRVNFTSSATGGSPPYSYSWKFGDGNTGTTQNATHAYSARGVLRATVTVNDTSLPSNSATDIVNILSFSGGLSLSVLDDAKNVVAGANVTSLSQPPGQARLNKATNSTGSVLVPCLPPGSYRIQLSKQGYETVLTTITIANSTIIQSVTLVGVQNAFPLALLEYAGVGIALAVILVAGSFLWRRSKRGKRTAQTLQTKP*