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13_1_40cm_2_scaffold_120916_1

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 3..518

Top 3 Functional Annotations

Value Algorithm Source
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 171.0
  • Bit_score: 294
  • Evalue 7.80e-77
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 172.0
  • Bit_score: 266
  • Evalue 1.60e-68
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 173.0
  • Bit_score: 123
  • Evalue 4.80e-26

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 516
GGCGGGTCCTATCCCTACTACGCGATCTACGAGACCCGTGACGGCAAGCTCCTCACGATCGGCTGCACCGAGCCCTGGCTCTGGGAGAACTTTTGCAAGGCGATCGGCCGGCCGGCGTTCGCGCGGTTCGCGCGCAAGCCCGACCAGTTCGTGCGCGCCGCCGACGCCGAGGAGGAGGCCGCACGGCGCGAGATCGAGGCGATCATCAAGACGCGCGACCGCGACGAGTGGTTCGCCCTCCTCACGAAGGCCGACGTGTGCGTCGGCAAGGTGTACGACGTCGAGGAGATGGTGCGGGACCCGCAGGTCAACCACCGGCGGATGATCGTGGACGTCGAGCACCCCAAGCACGGGCGCGTCCGCCAGGTCGGCGTCGCGATCAAGCTTTCCGACACGCCCGGGACGATCCGGAGCGCCGCGCCCCTGCCCTCCGAGCACACCGAGGACGTGCTGAAGGACCTCGGGCTTTCCGCGCCTGACATCGGGCGGCTCCGGGACACGGGCGTCATCGAGTAG
PROTEIN sequence
Length: 172
GGSYPYYAIYETRDGKLLTIGCTEPWLWENFCKAIGRPAFARFARKPDQFVRAADAEEEAARREIEAIIKTRDRDEWFALLTKADVCVGKVYDVEEMVRDPQVNHRRMIVDVEHPKHGRVRQVGVAIKLSDTPGTIRSAAPLPSEHTEDVLKDLGLSAPDIGRLRDTGVIE*