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13_1_40cm_2_scaffold_34572_1

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(1..354)

Top 3 Functional Annotations

Value Algorithm Source
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 118.0
  • Bit_score: 179
  • Evalue 3.30e-42
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] id=14625625 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 111.0
  • Bit_score: 162
  • Evalue 2.30e-37
shc; squalene-hopene cyclase (EC:5.4.99.17) similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 116.0
  • Bit_score: 133
  • Evalue 4.20e-29

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGTTACCATCTGGCGTCGTGACGGTCCTCGACGACGCCATCGCCCGCGCCCAGGCCTACCTCCTCGCTCACCAGGCGCCAGACGGACATTGGATCGGCGAGCTCGAGGCCGACACCACGATCACCTCCGAATACCTCTTGCTCGGTCACCTGATCGATCGGATCGACCGCCGCAAGGAGGCCAAGGCCGTCCAGTATCTCCGTCGCGAGCAGCTCCCGGACGGCGGCTGGAGCCTCTTCGCAGGCGGCCCGATAGATCTGTCCGCCACGATCAAGGCGTACTTCGCGATGAAGCTGGCCGGCGTGAGCGTCGACGACCCCGCGCTGGTCGCGGCGCGCGAGCGCATCCGCGAA
PROTEIN sequence
Length: 118
MLPSGVVTVLDDAIARAQAYLLAHQAPDGHWIGELEADTTITSEYLLLGHLIDRIDRRKEAKAVQYLRREQLPDGGWSLFAGGPIDLSATIKAYFAMKLAGVSVDDPALVAARERIRE