ggKbase home page

13_1_40cm_2_scaffold_34572_7

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 4365..5246

Top 3 Functional Annotations

Value Algorithm Source
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 292.0
  • Bit_score: 446
  • Evalue 2.10e-122
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 287.0
  • Bit_score: 390
  • Evalue 1.70e-105
  • rbh
squalene/phytoene synthase similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 276.0
  • Bit_score: 259
  • Evalue 1.60e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGATCGCGGACCTCACCGCCCGGCTCACACGGAAGAGCCGCTCGAACTTCTACTACGCGTTTCTCACGCTGCCGCGCCCGCGTCGCGAGGCGCTCTACGCGGTGTACGCCTTCTGCCGGACCGTGGACGACATCGCGGATCTCGGCGGCGAGCGGGGCGTCGACCCGCCGGTCCAGCGCCGGGAGCTCCGGCGCTGGCGCGAGGAGGTGGCGCGCTGCTACGCGCCGGGCGCGGTCCCCGACCACCCGATCGCGCTCAGGCTCCAGGCCGCCGTACGCGCCTACGCGATCCCGCGCGCGGCGCTCGAGGCGATCATCGACGGCGTCGAGATGGACCTCGACCGCGTCGCCTACGAGACGGCGGAGGAGCTCTACCCGTACTGCTACCGCGTCGCCTCTGCGGTCGGGCTCTGCTGCATCGAGATCTTCGGCTACACCGACCCCCGCGCGCGCCAGTACGCGATCAAGCTGGGCCAGGCACTCCAGCTCACGAACATCATCCGCGACGTCGGCGCCGACGCCCGGGCCGGGCGCGTGTATGTGCCGCAGGAAGACCTCCGGGCGTTCGGCGTCACCGTCGACGATCTGAAGGGGGCTCGTTACACCGAGCCGTTCGTGCGCCTGATGACCCACCAGGCGGTACGCGCGCGGCAATTCTACCGGGTCGCATGGGAGAGCTTTCCCGCGGCCGACGCGCGCTCGCTCGTGCCGGCCGAGATCATGGGGCGGATCTACCTCGCCCTGCTCGACGAGATCGAGACGCGACGGTTCCGTGTGTTCGGTGAGCGCGTCACGGTGCCGGTTGCGAAGAAGCTCGCGATCGCGCTCCGCTGCTGGGTTGCCGCCAGGCTCGGGCGCGCCGCCCGGACGCTCGCCGCGTGA
PROTEIN sequence
Length: 294
MIADLTARLTRKSRSNFYYAFLTLPRPRREALYAVYAFCRTVDDIADLGGERGVDPPVQRRELRRWREEVARCYAPGAVPDHPIALRLQAAVRAYAIPRAALEAIIDGVEMDLDRVAYETAEELYPYCYRVASAVGLCCIEIFGYTDPRARQYAIKLGQALQLTNIIRDVGADARAGRVYVPQEDLRAFGVTVDDLKGARYTEPFVRLMTHQAVRARQFYRVAWESFPAADARSLVPAEIMGRIYLALLDEIETRRFRVFGERVTVPVAKKLAIALRCWVAARLGRAARTLAA*