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13_1_20cm_4_scaffold_64477_1

Organism: 13_1_20CM_4_Euryarchaeota_52_7

partial RP 20 / 55 MC: 13 BSCG 7 / 51 MC: 3 ASCG 21 / 38 MC: 16
Location: 3..755

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 254.0
  • Bit_score: 344
  • Evalue 9.60e-92
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S667_METSF similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 240.0
  • Bit_score: 217
  • Evalue 1.70e-53
DNA-directed RNA polymerase, subunit A'' similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 240.0
  • Bit_score: 217
  • Evalue 4.70e-54

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 753
CTCACCCATGCTACGCTAGGGGATATCGCTAGCTCATTCGAGTCCGATGTTACACGGATGAGAATCGATGTTAAACTGAACCCGCAAGTGATGCGGGAGAGAGAGATTACCGTCCAGGATGTGCGGGATGCGGTGAAACCGCCGAATTGCGAGGTGAAAGTCGAGGGATACCATGTGGAGATCAAGTCGAAGGAGCTTGAGATCCCTCAGTTCAGGCGATTGACCGGCAAGCTACTCGTCTATCATGTCAAAGGCTTGCCGGCTGTCAGAAGAGCTCTCGTTATCGAGGAGAAGGGTGAATGGATAGTCAGAACAGAGGGCTCCAGCCTCGCCTTGGCCTTTGAAGTCCCAGGTGTTGACACAAGCAGAACAGTCAGCAACAACATCAACGAGACGGCCGTCGTTCTCGGGATCGAGGCAGCCCGCAACGTAATAATCAAAGAAGCGCTAGGGGTACTGGAGGAACAAGGACTCGACGTGGACATTCGACACGTGATGCTAGTAGCTGACATGATGACCTCATCAGGCGAAGTTCTCCAAGTTGGACGCCACGGTGTCAGCGGAGAGAAGGCGAGCACACTTGCGAAGGCAGCCTTCGAGATAACAATTCCAACCATCGTAGACGCTGCCGTGAAAGGAATCGTTGATACACTGAGGGGCGTTGCCGAGAACGTGATCGTCGGTCAACAAGTACCAATGGGCACAGGTCTCATAGAGGTCTCCATGTCGATGTCCCGGAAAGGGAGCAAGTAG
PROTEIN sequence
Length: 251
LTHATLGDIASSFESDVTRMRIDVKLNPQVMREREITVQDVRDAVKPPNCEVKVEGYHVEIKSKELEIPQFRRLTGKLLVYHVKGLPAVRRALVIEEKGEWIVRTEGSSLALAFEVPGVDTSRTVSNNINETAVVLGIEAARNVIIKEALGVLEEQGLDVDIRHVMLVADMMTSSGEVLQVGRHGVSGEKASTLAKAAFEITIPTIVDAAVKGIVDTLRGVAENVIVGQQVPMGTGLIEVSMSMSRKGSK*