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13_1_20cm_4_scaffold_68436_3

Organism: 13_1_20CM_4_Euryarchaeota_52_7

partial RP 20 / 55 MC: 13 BSCG 7 / 51 MC: 3 ASCG 21 / 38 MC: 16
Location: 1018..1836

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 5.40e-74
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 271.0
  • Bit_score: 349
  • Evalue 5.60e-93
exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 1.50e-74

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 819
GTGTCAGCAACTCCCCAACTTCCACCAGTGGCCAAATTGGAACAGAAGACTGTGGTGGATCTGGTTACAAAGGGCAAACGGATTGACGAGAGAGGGCTAGAAAGCTACAGACCAATCCAGATCCAAGTAGGGCTTATTGAAAAGGCAAACGGTTCAGCCCAAGTCTACCTAGGCAAATCAAAAGTTCTTGCGGGGATAAAGATCGAGACTGGCGAGCCCTTCCCAGACACCCCAGAAGAAGGAGTCCTTACCGTGAACGCGGAACTAGTCCCGCTCGCGTCGCCATCCTTCGAGATGGGGCCCCCCAGCGAAGCGGCGATCGAACTCTCCAGGGTCGTTGACAGAGGGATAAGAGAGTCCAAGGCTATCGATCTGAAATCCCTGGTAATCCAGAAAGGAAAGAAGGTCCAAGTTGTTTACGTTGACGTCTACGTGCTCGATCACGACGGCAATCTGATTGATGCAGCATCCATGGCCGCCCTAGCAGCACTCGCCAATTCAAAGGTCGCCAAGATGGAAATGAAGGGCGATGAAGTGATCGAAAAGGGCGGACATCATCAACTACCCCTCAACAATCACCCAGTCGCGGTTACTTTCGCCAAGATCGACAAGACAATCGTCGTAGATCCATCACTGGAAGAGGAGCAGGTGATGAGCGCGAGGCTAACAGTGACGATAGACAAGAACGGCCACCTATGTGCGATGCAGAAGGGAGGACTCTATGGCTTTACCCCGGATGAATTGAAAAGGGCCGTCAACTTGGCAGTTGCAAAGGCAGCAGAGAACCGGGCCAAGATAATGGCCGCGGCGAAAGGCTGA
PROTEIN sequence
Length: 273
VSATPQLPPVAKLEQKTVVDLVTKGKRIDERGLESYRPIQIQVGLIEKANGSAQVYLGKSKVLAGIKIETGEPFPDTPEEGVLTVNAELVPLASPSFEMGPPSEAAIELSRVVDRGIRESKAIDLKSLVIQKGKKVQVVYVDVYVLDHDGNLIDAASMAALAALANSKVAKMEMKGDEVIEKGGHHQLPLNNHPVAVTFAKIDKTIVVDPSLEEEQVMSARLTVTIDKNGHLCAMQKGGLYGFTPDELKRAVNLAVAKAAENRAKIMAAAKG*