ggKbase home page

13_1_20cm_3_scaffold_129814_1

Organism: 13_1_20CM_3_Fungi_48_4

partial RP 29 / 55 MC: 10 BSCG 5 / 51 MC: 2 ASCG 17 / 38 MC: 9
Location: 1..456

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=1097556 species="Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Taphrinomycetes; Taphrinales; T UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 106.0
  • Bit_score: 145
  • Evalue 6.80e-32
DNA ligase n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) RepID=R4XDW7_TAPDE similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 106.0
  • Bit_score: 145
  • Evalue 4.80e-32
ATP-dependent DNA ligase I similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 113.0
  • Bit_score: 66
  • Evalue 8.00e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Taphrina deformans → Taphrina → Taphrinales → Taphrinomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 456
ATTTTTGTGATCCATCCCTCAGATTCATGTACTATACTAACGAGTACTGTAGAACCCGACAAACGTACCCTCGGCTGGTGCAAAGTCAAAAAAGACTACGCGGACGGCTCCGACTCAATGGACTTAATTCCCATCGGTGCCTGGCACGGCAGCGGTCGCAAAGCCGGATGGTGGTCACCTATCCTCCTTGCACTCAGAAACGAAGAAGATGGCACTTTACAAGCAGCGTGTAAATGTATTAGCGGGTTCACGGATCAATTCTACAAGGACTTGAATGTTAAGTACAGTCCTGAAGGGGAGAATACGACGTTCGAGAGACCTTGGGATTATGAGAGTGCTTTGACGCCGGATAGTACTTCTCCCATGCAATCGCATTTTTTGACCCTTCTCAAATACTTCTTGTCCTTCAATGCTTCAAGTTGGCAATTGGGATTATTATTTTTTCTGATATTTTGA
PROTEIN sequence
Length: 152
IFVIHPSDSCTILTSTVEPDKRTLGWCKVKKDYADGSDSMDLIPIGAWHGSGRKAGWWSPILLALRNEEDGTLQAACKCISGFTDQFYKDLNVKYSPEGENTTFERPWDYESALTPDSTSPMQSHFLTLLKYFLSFNASSWQLGLLFFLIF*