ggKbase home page

13_1_20cm_4_scaffold_105757_3

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(432..1025)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TSN0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 142.0
  • Bit_score: 108
  • Evalue 8.60e-21
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_16_Actinobacteria_67_10_curated UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 192.0
  • Bit_score: 213
  • Evalue 2.00e-52
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 142.0
  • Bit_score: 108
  • Evalue 2.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCTACGCGATCATCCACGTCGGCGGTAAGCAATACCGCGTCCGGGAGGGCGAGCGGCTACTCGTCGATCGGCTGAAGACCGACGAGGGGAAGACGTTCAGCCCCCGCGTCCTGCTCGTCGGCGGCAACGGCAACACCGATCTGTCGCCCTCGACGACGGTCACAGCGCGGGTCGTCGGCCATGTGCTGGGCGACAAGATCCGCATCGGCAAGTACAAGCGGCGGACCGGCTACCGGAAGCACACAGGCTTCCGCAGCAGCCTGACCCAGATCGAGATCGAGTCGATCGGGGCCGGCGCACGGAAGGCCGCCGCGCCTGCGAAGCCGAAAGCGGAGACGCCGGCCAAGCCCAAGGCCGAGGCGGCACCCGCAGCACCCGCGGAGCCGACGGCCGAGGCGCCGCACGCGACTCATGTCGCGCATCCGCCGAAGGGGTACGAGGACATGACGGTGGCGCAGATCTCCGAGGCGGCTTCCGGCTGGCGGCGCCCGAACCTCGAAGCCGCGCTCGAGTACGAGCGCGCGCACGCGAATCGAAAAGGCGCGATCGCGGCGCTGGAGTCGGCACTCGCAAAGAAGGAGAGCCACTAA
PROTEIN sequence
Length: 198
MSYAIIHVGGKQYRVREGERLLVDRLKTDEGKTFSPRVLLVGGNGNTDLSPSTTVTARVVGHVLGDKIRIGKYKRRTGYRKHTGFRSSLTQIEIESIGAGARKAAAPAKPKAETPAKPKAEAAPAAPAEPTAEAPHATHVAHPPKGYEDMTVAQISEAASGWRRPNLEAALEYERAHANRKGAIAALESALAKKESH*