ggKbase home page

13_1_20cm_4_scaffold_11463_4

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(1711..4716)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B38B6B similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 999.99
  • Bit_score: 819
  • Evalue 5.00e-234
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG91667.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 999.99
  • Bit_score: 922
  • Evalue 4.50e-265
TonB-dependent outer membrane protein, SusC/RagA similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 999.99
  • Bit_score: 922
  • Evalue 9.00e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3006
ATGAGACGAGCAGGGTGCGTGATCGGCGCGCTGTTGGCGGTGCTGTGGTCGGTGCCGCTGGGCGCGCAGCAGGCCACGGGGACGGTGCGCGGACGGGTGACGGACGCGACGACGCAGCAACCCCTCGCCGGAGCCACCATCAGCGTGGGCACGCGTAGTGTGCTGTCGCAGGGTGATGGTCGCTACGTCATTACGGGTGTAGCGGCGGGCACGGACTCTGTGCGGGCGAGACTGATCGGGTACGCTCGTGCGTCGCAGACGGTCACGGTCGCGGAGCATGACACGCTCGTCGCCGATCTCGCCCTGACCTCCCAGGCGGTCAACCTCTCGGCAGTCGTGGTGACCGGGTACGGGACGCAGCGGGCGGGCGACATCACCGGCTCCGTGACGGCCGTGACCGACTCCCAGTTCAACACCGGCCGGATCCTGAGCCCCCAGATGCTGATCCAGAGCAAGGTGCCCGGCGTGCAGGTCGTAGACAACAACGATCCGGGCGGCGGCTTGTCGCTCAGGATCCGCGGCCCCACGTCCGTGACGGCGAGCAGCGATCCTCTCTACGTCGTCGACGGCGTGCCGCTCGGCACGGGCGCGGGTGGCGGCCTCTCCGCCGGTCGCGACCCTCTCAACTTCCTGAGCCCGGGGGATATCGAGACGATTACGGTACTGCGCGACGCCTCCGCTGCGGCGATTTACGGGACGAACGCGGCGAACGGCGTCGTGCTCATCACCACGAAATCTGGAAAGGGCAGCCAGGGACCTCGGGTCGAGTATAGCAGCAGCGCAACCGCTTCGTCCGTGACCAGGCTGCCGGACATGTTGAACGCGGCCCAGTTCGCCGCTGCCGTGGCCACGTACGCACCCACACGGGTCGGTTCGCTGCTCGGCGCCAACACGAACTGGTTCAACCTCATTGACCGCACCGCATATGGTCAGGAACACAACTTTTCCCTCACCAACGGGACCGCCGATGGTGGCTACCGCCTGTCGCTCGGTTATCTCAAACAGGACGGCGTCATTCGGGCGAGCTCGACGCAGCGGCTGTCGCTGGGGTTCAACTATCACCAGCGATTGCTGAACGACCATCTGAGCCTGCACACCAGCGTGCGGGGGGCGCGAGCGGTCGATCAGTTCACCCCCGGGGACGTACTAGGCAACGCCGCCGCGATGGCGCCGACGCAACCCGTCTTCGATCCGACCAGCTCGACCGGCTACTGGGATTGGCGGACCACCAACGCCTCCGCGAGCAACCCGGTTGCCAGCTTGAACCTGGCGAGGGACCACGGCACGACCTGGCGCAGCGTCGGAGACGCGCAGGCAGAGTACCGCGTGCCCTTCCTCGAGGGATTGTCCGCCAACGTGAACCTCGGTTACGACCTCACGAGCGCGGCTCGAACGACGTTCTACCCGAGCAACCTGGCTGCCCAGGTGCGACAGGGCCAGGGCAGCCTCTTCATGTCGAAAAACAGTCAAACGAATTCGGTGCTCGAGACGTACCTGGGTTACCGCCCGCCACGCACCTACGGACCCGGCACCGTTGACCTCGTGGGGGGCTACTCATACGCACAGGCGCGCAGCGAGTATCCCTACCTCCGGGAGACGGGCCTCAATACCAACCTGCTCGGCGACAACGGAATTGGGACGGCCGCGAACGTCCGGAATGTTGACTCCATCGCCGAGTACAAGCTCATCTCCTTCTTCGGGCGACTCAATTACAACATCTCGGACCGCTACCTCATCGCGATGAGCCTCCGTCATGACGGCTCCTCGCGCTTTGGCCCGGGGAACCAGTGGGGCACGTTCCCCTCCGTGGCGCTGGCGTGGCGGGTCTCGCAGGAGCCGTTCATGCGACTGGGGTCGCTGTCAGACCTGAAGGTGCGCGCTTCCTGGGCCAGGACCGGCAACCAGGCGTTCGGGGACTACCTGCAATACACGACGTATACGTTCAGCGACGTGGCGACGCAGGTGTGGTTCGGTGACCACTTCGTCACCACGATCCGCCCTAGCCCGGTCGACACGACCATACGCTGGGAAAGGACCAGCGCGTACAACGTCGGTCTCGACTTCGGCTTCAATAACCAGCGCTACAGCGGCTCGATCGACTGGTACACCAAGAACACCAGCGACCTGATCTTCAACGTTCCCGTCGACCCTGCGGCGAATCTCGGAAACTTTGTCACGACGAACATCGGCAGCATGAGGAACCGGGGCTTCGAGCTCAGCCTGAACGCTCGTCTGTGGGAGGGACGGGCGACCGGGCTCAGTTGGACGGCGTCGTTCACCGCCAGTCACAACACCAATGAGCTGCTCAGCATCAACCCGAACAAGAGCGTGACGAGGATCCTGATCGGCGGCATCTCCGGCGGCGTCGGCAACCTGATCCAGGTCCTGCAGCCGGGCGTACCGGTCAATTCGTTCTACGTCTTTCAGCAAAAGTACGGCCCGAATGGGAAACCGATCTACAGCGACACGCTGATCAACATGTACGTGGACCAGAACGGGGACGGCAAAATCACCGATTCCGATCGTCGGCCGTTCCACGACCCGGCTCCGAAATGGATACTGGGGCACTCGTCGTATCTGACCTACGGGCGCTTCGACGCCAGCTTCACGCTGCGGGCCTACTTGGGGAACTGGGTCTATAACAACGTGGCTTCCGCCAACGGGGCCTACCAGAACCTTACGGGCTCGGGAATGCCGAGCAATCTGCACGCGTCGGTGCTCACGACCGGGTTCGTCGTGCCGCAATACGACTCGGACTATTTTGTGCAGAACGCCTCCTTTCTGCGGATGGACAACATCACGCTCGGCTACTCGCTTACCTATCGCGGGCAGCCGCTGCGCGTGTTCGCCACCATGCAGAACGCGTTTACCATCACGGGCTACAGCGGTGTGGATCCGACGGCTACGGCTTATTCGAATACCGGGAGCCCCCCGGGGTTTGGCATCGACAACAACATCTATCCTCGTGCGCGCACCATCACCACCGGCCTGAGCTTCCGGTTCTAG
PROTEIN sequence
Length: 1002
MRRAGCVIGALLAVLWSVPLGAQQATGTVRGRVTDATTQQPLAGATISVGTRSVLSQGDGRYVITGVAAGTDSVRARLIGYARASQTVTVAEHDTLVADLALTSQAVNLSAVVVTGYGTQRAGDITGSVTAVTDSQFNTGRILSPQMLIQSKVPGVQVVDNNDPGGGLSLRIRGPTSVTASSDPLYVVDGVPLGTGAGGGLSAGRDPLNFLSPGDIETITVLRDASAAAIYGTNAANGVVLITTKSGKGSQGPRVEYSSSATASSVTRLPDMLNAAQFAAAVATYAPTRVGSLLGANTNWFNLIDRTAYGQEHNFSLTNGTADGGYRLSLGYLKQDGVIRASSTQRLSLGFNYHQRLLNDHLSLHTSVRGARAVDQFTPGDVLGNAAAMAPTQPVFDPTSSTGYWDWRTTNASASNPVASLNLARDHGTTWRSVGDAQAEYRVPFLEGLSANVNLGYDLTSAARTTFYPSNLAAQVRQGQGSLFMSKNSQTNSVLETYLGYRPPRTYGPGTVDLVGGYSYAQARSEYPYLRETGLNTNLLGDNGIGTAANVRNVDSIAEYKLISFFGRLNYNISDRYLIAMSLRHDGSSRFGPGNQWGTFPSVALAWRVSQEPFMRLGSLSDLKVRASWARTGNQAFGDYLQYTTYTFSDVATQVWFGDHFVTTIRPSPVDTTIRWERTSAYNVGLDFGFNNQRYSGSIDWYTKNTSDLIFNVPVDPAANLGNFVTTNIGSMRNRGFELSLNARLWEGRATGLSWTASFTASHNTNELLSINPNKSVTRILIGGISGGVGNLIQVLQPGVPVNSFYVFQQKYGPNGKPIYSDTLINMYVDQNGDGKITDSDRRPFHDPAPKWILGHSSYLTYGRFDASFTLRAYLGNWVYNNVASANGAYQNLTGSGMPSNLHASVLTTGFVVPQYDSDYFVQNASFLRMDNITLGYSLTYRGQPLRVFATMQNAFTITGYSGVDPTATAYSNTGSPPGFGIDNNIYPRARTITTGLSFRF*