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13_1_20cm_4_scaffold_165394_3

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(1082..1300)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZW95_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 59.0
  • Bit_score: 67
  • Evalue 6.20e-09
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EAY25333.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina AT UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 59.0
  • Bit_score: 67
  • Evalue 8.60e-09
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 59.0
  • Bit_score: 64
  • Evalue 1.90e-08

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Taxonomy

Microscilla marina → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 219
GCCGCCGTGCAGCGCGCCATCGCCGAGCTGCCGCCGCGCTGCCGCGCGATCTTCGTGCTGCGCCGGCGCGAGCAGCTGAGCTACCGCGAGATCGCGGTACGCCTCGGCGTCTCGCTCGGTACGGTCAAGTCGCAGATGTGGCGCGCCACGCTGCGGCTGCGCGCCAAGCTGGCCCCCTACCTCGCTCGTCCGGGCATTCCCGAAGACCGCGCCGGATAG
PROTEIN sequence
Length: 73
AAVQRAIAELPPRCRAIFVLRRREQLSYREIAVRLGVSLGTVKSQMWRATLRLRAKLAPYLARPGIPEDRAG*