ggKbase home page

13_1_20cm_4_scaffold_217869_1

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: 57..1139

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides massiliensis RepID=U6RQM0_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 314.0
  • Bit_score: 289
  • Evalue 6.40e-75
TonB-dependent receptor plug Tax=RBG_13_Bacteroidetes_43_22_curated UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 330.0
  • Bit_score: 341
  • Evalue 1.20e-90
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 328.0
  • Bit_score: 232
  • Evalue 1.60e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bacteroidetes_43_22_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
GTGAAAGTCTCCCCCAGCGCTGTTGAGTACCCGCAGCACGTGTCGCCTCGTCGCATCTCCCTCGTCGCCCCTCTCGTGTTCGGGCTGGTATCGGTCCAGATGGGCCGCGCCCAGGAGCCCGTAGCCGCTCCGCCGTCTCAGGCGCAATCGGTGACCGGGACGGTGACGAGCTCGGTAAGCGGACTGCCACTGCCATCCGTGCGTGTGAGCATCAAGGGCACGCACCAGCAGACCGCTTCCAATGGCGAGGGCCGCTATACGCTGAGCGTGCCGTCGCTACAGGATACGCTGCATTTCTCTCTCATCGGCTATCGACCTCAGGACGTGCCGATCGACGGACGCACCGAGATCGACGCTCAACTAACGGCGCTGCCCGCCCAACTCGAGGCACAGGTCGTTACGGCGTACCGGGTGCAGGACCGGGGCACGGTGACCGGGGCCGTCTCGAGCGTCAGCGGCGCGGTCGTTTCCAATGTCCCCGTGGACAACCTCTCGAACGCGCTCCAGGGCCGGCTCGCGGGCGTGAGCGTCACCCAGAATGCGGGCACGCCCGGGCGCGAATCGAGTATCCGGGTCCGCGCGGTCGGCACGTTCAACAACGCCGACCCGCTGTACGTCATCGACGGCGTCGTGAGCGACAAGTTCGCCTTCGACGGGCTGAACCCGGAGGACGTGGAGAACATCTCGGTGTTGAAGGACGGCGCCACGGCCGCGCTGTACGGTTCGCGCGCCGCGAACGGCGTACTCCTCGTGTCGACGCGACGGGGCGCGGTCAAGCCGACCGAGTTCGCCTACAACGTCACCGTCGGCGCGCAAACCGCGCCCAGGATCCCACCCACGCTCGATGCCTACCAGCACGCCAGGACGATCAACGACTTCCTGAGCTATAACCGCTTCCCGACCAGCGACGTCCGCTACTACACGGACGACGAGCTGCAGTACTTCCAGACGCATTCCTGGGACTGGATCGCCGCCCTGTGGAGACGACCGCTCGACGTGCAACACTCCCTCAACATCAGCGGCGGTTCGGACGGGGTGAGGTACTTCCTGGGCGGTTCCTTCCTCGATGAGACGGGCTCGTTC
PROTEIN sequence
Length: 361
VKVSPSAVEYPQHVSPRRISLVAPLVFGLVSVQMGRAQEPVAAPPSQAQSVTGTVTSSVSGLPLPSVRVSIKGTHQQTASNGEGRYTLSVPSLQDTLHFSLIGYRPQDVPIDGRTEIDAQLTALPAQLEAQVVTAYRVQDRGTVTGAVSSVSGAVVSNVPVDNLSNALQGRLAGVSVTQNAGTPGRESSIRVRAVGTFNNADPLYVIDGVVSDKFAFDGLNPEDVENISVLKDGATAALYGSRAANGVLLVSTRRGAVKPTEFAYNVTVGAQTAPRIPPTLDAYQHARTINDFLSYNRFPTSDVRYYTDDELQYFQTHSWDWIAALWRRPLDVQHSLNISGGSDGVRYFLGGSFLDETGSF